Shigella sp. PAMC 28760: A0259_06160
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Entry
A0259_06160 CDS
T04390
Name
(GenBank) RHS element protein
Organism
shq
Shigella sp. PAMC 28760
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF4329
DUF6531
RHS
PAAR_motif
Motif
Other DBs
NCBI-ProteinID:
AMR22251
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Position
1272534..1276814
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AA seq
1426 aa
AA seq
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MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPG
ETDLALPGPLPFILSRTYSSYRTRTPAPVGVFGPGWKAPSDIRLQLRDDALVLNDNGGRS
IHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWGALPPDIRLSPHLYLATNSAQ
GPWWILGWSERVPGAEDVLPAPLPPYRVLTGLADRFGRTLTYRREAAGDLAGEITGVTDG
AGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSASAFPDTLPGTEYGPDRGIRLSAVWL
MHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAGRPE
MRYRYDDTGRVVEQLNPAGLSYRYLYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELA
DGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQLTA
VVYPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWSRY
GQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRHYDNRGRLTSVKDAQGRETRYEY
NAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSVF
SYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVILWYYDASDRITHRTVNGEPAE
QWQYDGHGWLTDISHLSEGHRVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKHAYN
EQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSMAGSNA
AYELTSTYTPAGQLQSQHLNSLVYDRDYGWSDNGDLVRISGPRQTREYGYSATGRLESVR
TLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHDEYGRLTEKT
DRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRE
RDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKA
QRRSLAETLQQEGSENGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTVEQL
ARQVEPEYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEENPHHVYQPY
RLPGQQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGLLQ
TWDDARSGACTGGVCGVLSRIIGPSKFDSTADAALDALKETQNRSLCNDMEYSGIVCKDT
NGKYFASKAETDNLRKESYPLKRKCPTGTDRVAAYHTHGADSHGDYVDEFFSSSDKNLVR
SKDNNLEAFYLATPDGRFEALNNKGEYIFIRNSVPGLSSVCIPYHD
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaaccagcggcgcgtcagggagatatgactcagtatggcggtcccattgtc
cagggttcggcaggtgtaagaattggcgcgcccaccggcgtggcgtgctcggtgtgtccg
ggcgggatgacttcgggcaacccggtaaatccgctgctgggggcgaaggtgctgcccggc
gagacggaccttgcgctgcccggcccgctgccgttcattctctcccgcacctacagcagc
taccggaccaggacacccgcgccggtgggagtgtttggccccggctggaaagcgccttct
gatatccgcttacagctacgcgatgatgcactggtactcaacgacaacggcgggcggagc
attcactttgagccgctgctgccgggggaggcggtgtacagccgcagcgagtcaatgtgg
ctggtgcgcggtggtaaggcagcgcagccggacggccacacgctggcgcggctgtggggg
gcgctgccgccggatatccggttaagcccgcatctttacctggcgaccaacagcgcacag
gggccgtggtggatactggggtggtcagagcgggtaccgggtgctgaggacgtactgcca
gcgccgctgccgccgtaccgggtgcttaccgggctggcagaccgtttcgggcggacgctg
acgtaccggcgtgaggccgcaggcgacctggccggggaaatcaccggcgtgacggacggt
gccgggcgggagttccgtctggtgctgaccacgcaggcgcagcgtgcggaagaggcccgc
acctcttcgctatcttcttctgacagttcccgccctctctcagcctcagcgttccccgac
acactgcccggtaccgaatacggccccgacaggggtatccgcctttcggcggtgtggctg
atgcacgacccggcatacccggagagcctgcccgctgcgccactggtgcggtacacgtat
acggaagccggtgaactgctggcggtatatgaccgcagcaatacgcaggtgcgcgctttc
acgtatgacgcgcagcacccgggccggatggtggcgcaccgttacgcgggaaggccggag
atgcgctaccgctacgacgatacggggcgggtggtggagcaactgaacccggcagggtta
agctaccgctatctttatgagcaggaccgcatcaccgtcaccgacagcctgaaccggcgt
gaggtgctgcatacagaaggcggggccgggctgaaacgggtggtgaaaaaagaactggcg
gacggcagcgtcacgcgcagcgggtatgacgcggcaggaaggctcacggcgcagacggac
gcggcgggacggaggacagagtacggtctgaatgtggtgtccggcgatatcacggacatc
accacaccggacgggcgggagacgaaattttactataacgacgggaaccagctgacggcg
gtggtgtacccggacgggctggagagccgccgggaatatgatgaaccgggcaggctggta
tcggagacatcgcgcagcggggagacagtacgctaccgctacgatgacgcgcacagtgag
ttaccggcgacgacaacggatgcgacgggcagcacccggcagatgacgtggagccgctac
gggcagttgctggcgttcactgactgctcgggctaccagacccgctatgaatacgaccgc
ttcggccagatgacggcggttcaccgcgaggaaggtatcagcctttaccgccactatgac
aaccgtggccggttaacctcggtgaaagacgcacagggccgtgaaacgcggtatgaatac
aacgccgcaggcgacctgactgccgtcattaccccggacggcaaccggagcgagacacag
tacgatgcgtggggaaaggcggtcagcaccacgcagggcgggctgacgcgcagtatggag
tacgatgctgccggacgtgtcatcagcctgaccaacgagaacggcagccacagcgtcttc
agttacgatgcgctggaccggctggtacagcagggcggctttgacgggcggacgcaacgt
tatcattatgacctgaccggaaaactcacgcagagtgaggatgagggacttgtcatcctc
tggtactacgatgcgtcggaccgcatcacgcaccgcacggtgaacggcgaaccggcagag
cagtggcagtatgatggccacggctggctgacagacatcagccacctgagcgaaggccac
cgtgttgccgtccactatggctatgacgataaaggccgcctgaccggcgaatgccagacg
gtggagaacccggagacgggggaactgctgtggcagcatgagacgaaacacgcatacaac
gagcaggggctggcaaaccgcgtcacgccggacagcctgccgccggtggagtggctgacg
tatggcagcggttacctggcgggcatgaagctgggcgggacgccgctggtcgagtatacg
cgggacaggctgcaccgtgagacggtgcgcagcttcggcagcatggcaggcagtaatgcc
gcatacgaactgaccagcacatacacccccgcaggccagttacagagccagcacctgaac
agcctggtatatgaccgtgactacgggtggagtgacaacggcgacctggtgcgcatcagc
ggcccgcgacagacgcgggaatacggctacagcgccacgggcaggctggagagtgtgcgc
accctcgcaccagacctggacatccgcatcccgtatgccacggacccggcgggcaaccgg
ctgccggacccggagctgcacccggacagtacactcacagtgtggccggataaccgcatc
gcggaggatgcgcactatgtctaccgccacgatgaatacggcaggctgacggagaagacg
gaccgcatcccggcgggtgtgatacggacggacgacgagcggacccaccactaccactac
gacagccagcaccgcctggtgttctacacgcggatacagcatggcgagccactggtcgag
agccgctacctctacgacccgctgggacggcgaatggcaaaacgggtctggcggcgggag
cgtgacctgacggggtggatgtcgctgtcgcgtaaaccggaggtgacgtggtatggctgg
gacggagacaggctgacgacggtgcagactgacaccacacgtatccagacggtatacgag
ccgggaagcttcacgccgctcatccgggtcgagacagagaacggcgagcgggaaaaagcg
cagcggcgcagcctggcagagacgctccagcaggaagggagtgagaacggccacggcgtg
gtgttcccggctgaactggtgcggctgctggacaggctggaggaagaaatccgggcagac
cgcgtgagcagtgaaagccgggcgtggcttgcgcagtgcgggctgacggtggagcaactg
gccagacaggtggagccggaatacacaccggcgcgaaaagctcatctttatcactgcgac
caccggggactgccgctggcgcttatcagcgaagacggcaatacggcgtggagcgcggaa
tatgatgaatggggcaaccagcttaatgaggagaacccgcatcatgtgtatcagccgtac
cgtctgccagggcagcagcatgatgaggaatcagggctgtactataaccgtcaccggtac
tacgatccgttgcaggggcggtatattactcaggacccgatggggttgaaagggggatgg
aatttatatcagtatcctttaaatccactacaacaaattgaccctatgggattattgcag
acttgggatgatgccagatctggagcatgtacggggggagtttgtggtgttctttcacgt
ataataggaccaagtaaatttgatagtactgcagatgctgcgttagatgctttgaaagaa
acgcagaatagatctctatgtaatgatatggaatactctggtattgtctgtaaagatact
aatggaaaatattttgcatctaaggcagaaactgataatttaagaaaggagtcatatcct
ctgaaaagaaaatgtcccacaggtacagatagagttgctgcttatcatactcacggtgca
gatagtcatggcgattatgttgatgaatttttttcaagtagcgataaaaatcttgtaaga
agtaaagataataatcttgaagcattttatctcgcaacacctgatggacgatttgaggcg
cttaataataaaggagaatatatttttatcagaaatagtgtcccgggattgagttcagta
tgcataccgtatcatgattaa
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