Shigella sp. PAMC 28760: A0259_07535
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Entry
A0259_07535 CDS
T04390
Name
(GenBank) DNA-dependent RNA polymerase
KO
K21313
Autographiviridae RNA polymerase [EC:
2.7.7.6
]
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03240 Viral replication
A0259_07535
09180 Brite Hierarchies
09185 Viral protein families
03200 Viral proteins [BR:
shq03200
]
A0259_07535
Enzymes [BR:
shq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A0259_07535
Viral proteins [BR:
shq03200
]
dsDNA viruses (phages)
Escherichia phage
A0259_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-ProteinID:
AMR22487
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Position
1530548..1533199
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AA seq
883 aa
AA seq
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MNTINIAKNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYEMGEARFRKMFERQLK
AGEVADNAAAKPLITTLLPKMIARINDWFEEVKAKRGKRPTAFQFLQEIKPEAVAYITIK
TTLACLTSADNTTVQAVASAIGRAIEDEARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKK
AFMQVVEADMLSKGLLGGEAWSSWHKEDSIHVGVRCIEMLIESTGMVSLHRQNAGVVGQD
SETIELAPEYAEAIATRAGALAGISPMFQPCVVPPKPWTGITGGGYWANGRRPLALVRTH
SKKALMRYEDVYMPEVYKAINIAQNTAWKINKKVLAVANVITKWKHCPVEDIPAIEREEL
PMKPEDIDMNPEALTAWKRAAAAVYRKDKARKSRRISLEFMLEQANKFANHKAIWFPYNM
DWRGRVYAVSMFNPQGNDMTKGLLTLAKGKPIGKEGYYWLKIHGANCAGVDKVPFPERIK
FIEENHENIMACAKSPLENTWWAEQDSPFCFLAFCFEYAGVQHHGLSYNCSLPLAFDGSC
SGIQHFSAMLRDEVGGRAVNLLPSETVQDIYGIVAKKVNEILQADAINGTDNEVVTVTDE
NTGEISEKVKLGTKALAGQWLAYGVTRSVTKRSVMTLAYGSKEFGFRQQVLEDTIQPAID
SGKGLMFTQPNQAAGYMAKLIWESVSVTVVAAVEAMNWLKSAAKLLAAEVKDKKTGEILR
KRCAVHWVTPDGFPVWQEYKKPIQTRLNLMFLGQFRLQPTINTNKDSEIDAHKQESGIAP
NFVHSQDGSHLRKTVVWAHEKYGIESFALIHDSFGTIPADAANLFKAVRETMVDTYESCD
VLADFYDQFADQLHESQLDKMPALPAKGNLNLRDILESDFAFA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgattaacatcgctaagaacgacttctctgacatcgaactggctgctatcccg
ttcaacactctggctgaccattacggtgagcgtttagctcgcgaacagttggcccttgag
catgagtcttacgagatgggtgaagcacgcttccgcaagatgtttgagcgtcaacttaaa
gctggtgaggttgcggataacgctgccgccaagcctctcatcactaccctactccctaag
atgattgcacgcatcaacgactggtttgaggaagtgaaagctaagcgcggcaagcgcccg
acagccttccagttcctgcaagaaatcaagccggaagccgtagcgtacatcaccattaag
accactctggcttgcctaaccagtgctgacaatacaaccgttcaggctgtagcaagcgca
atcggtcgggccattgaggacgaggctcgcttcggtcgtatccgtgaccttgaagctaag
cacttcaagaaaaacgttgaggaacaactcaacaagcgcgtagggcacgtctacaagaaa
gcatttatgcaagttgtcgaggctgacatgctctctaagggtctactcggtggcgaggcg
tggtcttcgtggcataaggaagactctattcatgtaggagtacgctgcatcgagatgctc
attgagtcaaccggaatggttagcttacaccgccaaaatgctggcgtagtaggtcaagac
tctgagactatcgaactcgcacctgaatacgctgaggctatcgcaacccgtgcaggtgcg
ctggctggcatctctccgatgttccaaccttgcgtagttcctcctaagccgtggactggc
attactggtggtggctattgggctaacggtcgtcgtcctctggcgctggtgcgtactcac
agtaagaaagcactgatgcgctacgaagacgtttacatgcctgaggtgtacaaagcgatt
aacattgcgcaaaacaccgcatggaaaatcaacaagaaagtcctagcggtcgccaacgta
atcaccaagtggaagcattgtccggtcgaggacatccctgcgattgagcgtgaagaactc
ccgatgaaaccggaagacatcgacatgaatcctgaggctctcaccgcgtggaaacgtgct
gccgctgctgtgtaccgcaaggacaaggctcgcaagtctcgccgtatcagccttgagttc
atgcttgagcaagccaataagtttgctaaccataaggccatctggttcccttacaacatg
gactggcgcggtcgtgtttacgctgtgtcaatgttcaacccgcaaggtaacgatatgacc
aaaggactgcttacgctggcgaaaggtaaaccaatcggtaaggaaggttactactggctg
aaaatccacggtgcaaactgtgcgggtgtcgataaggttccgttccctgagcgcatcaag
ttcattgaggaaaaccacgagaacatcatggcttgcgctaagtctccactggagaacact
tggtgggctgagcaagattctccgttctgcttccttgcgttctgctttgagtacgctggg
gtacagcaccacggcctgagctataactgctcccttccgctggcgtttgacgggtcttgc
tctggcatccagcacttctccgcgatgctccgagatgaggtaggtggtcgcgcggttaac
ttgcttcctagtgaaaccgttcaggacatctacgggattgttgctaagaaagtcaacgag
attctacaagcagacgcaatcaatgggaccgataacgaagtagttaccgtgaccgatgag
aacactggtgaaatctctgagaaagtcaagctgggcactaaggcactggctggtcaatgg
ctggcttacggtgttactcgcagtgtgactaagcgttcagtcatgacgctggcttacggg
tccaaagagttcggcttccgtcaacaagtgctggaagataccattcagccagctattgat
tccggcaagggtctgatgttcactcagccgaatcaggctgctggatacatggctaagctg
atttgggaatctgtgagcgtgacggtggtagctgcggttgaagcaatgaactggcttaag
tctgctgctaagctgctggctgctgaggtcaaagataagaagactggagagattcttcgc
aagcgttgcgctgtgcattgggtaactcctgatggtttccctgtgtggcaggaatacaag
aagcctattcagacgcgcttgaacctgatgttcctcggtcagttccgcttacagcctacc
attaacaccaacaaagatagcgagattgatgcacacaaacaggagtctggtatcgctcct
aactttgtacacagccaagacggtagccaccttcgtaagactgtagtgtgggcacacgag
aagtacggaatcgaatcttttgcactgattcacgactccttcggtaccattccggctgac
gctgcgaacctgttcaaagcagtgcgcgaaactatggttgacacatatgagtcttgtgat
gtactggctgatttctacgaccagttcgctgaccagttgcacgagtctcaattggacaaa
atgccagcacttccggctaaaggtaacttgaacctccgtgacatcttagagtcggacttc
gcgttcgcgtaa
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