Shigella sp. PAMC 28760: A0259_09105
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Entry
A0259_09105 CDS
T04390
Name
(GenBank) trimethylamine N-oxide reductase cytochrome c-type subunit
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00680
Methane metabolism
shq01100
Metabolic pathways
shq01120
Microbial metabolism in diverse environments
shq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
A0259_09105
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A0259_09105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shq02000
]
A0259_09105
Transporters [BR:
shq02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
A0259_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cytochrom_NNT
TorC_3rd
Mtrc-MtrF_II-IV_dom
Cytochrome_C7
IRF-2BP1_2
Cytochrom_c_NrfB-like
Paired_CXXCH_1
Cytochrome_CBB3
DHC
GF_recep_IV
YbfN
Motif
Other DBs
NCBI-ProteinID:
AMR22774
LinkDB
All DBs
Position
1842499..1843671
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AA seq
390 aa
AA seq
DB search
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEE
YKQSVHFQNASGVRAECHDCHISPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRA
ELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQ
LPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDG
DWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQ
ATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLD
KREERTLLKYLQMNASDTAGKAHGDKKEEK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaactctggaacgcgctacgccgacccagtgctcgttggtcggtactggcgctg
gtcgcaattgggattgtgattggcattgcgctgattgtattgccacacgttgggatcaaa
gtcaccagcacaaccgaattttgtgtcagttgccacagtatgcaaccggtgtatgaagaa
tataaacagtcggtgcatttccagaacgcctccggcgtgcgagctgaatgccatgactgt
catatctcgccggatattccaggcatggtgaagcgcaaactggaagcgagcaatgatatc
taccagacctttattgctcactccattgatacacctgaaaaattcgaagccaaacgcgcg
gaacttgccgagcgtgaatgggcgcgaatgaaagaaaacaactcggcaacctgccgctcc
tgccataactacgatgcgatggatcatgcgaagcagcatcctgaagcagcacgtcagatg
aaggtggcagcgaaagataatcaatcctgcatcgactgtcataaaggtattgcccaccag
ttaccggatatgagtagcggcttccgtaagcagttcgatgagctgcgcgccagtgctaat
gacagtggtgacacgctgtactctattgatattaagccaatttatgcggcgaaaggcgat
aaagaagcctctggttctctgctgcctgcttcggaagtgaaagtccttaaacgtgacggc
gactggctgcaaattgaaattaccggctggacggaaagcgccggacgtcagcgtgtactc
acccaattcccaggtaaacgcatctttgttgcctcgattcgtggtgatgtgcagcagcag
gtaaaaacgctggagaaaaccaccgttgccgacaccaataccgagtggagcaagttgcag
gccactgcgtggatgaagaaaggcgacatggtgaacgatatcaaaccgatctgggcttat
gcggattcgttgtacaacggcacctgtaaccagtgccacggcgcaccggaaatcgcccac
tttgacgctaacggttggatcggcacgctcaacggcatgattggctttaccagtctcgat
aaacgtgaagaacgcaccttgttgaaatatctgcaaatgaatgcgtctgacaccgcaggt
aaggctcacggcgataagaaggaagaaaaataa
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