Shigella sp. PAMC 28760: A0259_11250
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Entry
A0259_11250 CDS
T04390
Name
(GenBank) polyamine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A0259_11250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shq02000
]
A0259_11250
Transporters [BR:
shq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A0259_11250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
ABC_ATPase
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMR23161
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Position
2247007..2248020
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AA seq
337 aa
AA seq
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MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA
ISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALE
KVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL
QQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV
FDGLMAEKLCGMTGSFALRPEHIRLNTPGELQANGTIQAVQYQGAATRFELKLNGGEKLL
VSQANMTGEELPATLTPGQQVMVSWSRDVMVPLVEER
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacgcagtggagtttgacaacgtctcgcggttgtacggtgacgtgcgcgcagta
gatggcgtcagtattgcgataaaagatggtgagttcttctctatgctggggccgtccggc
tccggcaaaaccacctgcctgcgcctgattgctggcttcgaacagctttccggcggcgct
atctctatctttggtaaacccgccagcaatctgccaccgtgggagcgggacgtgaatact
gtctttcaggactacgcgctatttccgcatatgtcgattcttgacaatgtcgcctatggg
ctgatggtcaaaggcgtgaataaaaagcagcggcacgcaatggcgcaagaggcgctggag
aaagtggcgttggggtttgtacatcaacgtaaaccgtcacaactttctggtggtcagcgc
cagcgggttgctatcgccagagcattggtgaatgaaccgcgcgtattgctgttggatgaa
ccgctcggcgcactggatctcaaattgcgtgagcagatgcagctggaactgaaaaaactg
caacagtctctcggtatcacttttatcttcgttacccacgatcagggcgaagcgttatcg
atgtccgatcgtgtggcggttttcaataatggacgcattgagcaggtcgattccccgcgc
gatctctatatgcgcccgcgcacgccgtttgttgccgggttcgttggtacatcgaatgtt
tttgatggactgatggcagagaaactttgtggcatgacgggaagcttcgccctgcgaccg
gaacatatccgcctcaacacccctggtgaactgcaggccaatggcacgatccaggcggtg
caatatcagggcgcggcaactcgttttgaactgaaattgaacggcggtgaaaaactgctt
gtgagtcaggccaatatgacaggcgaagaactgcctgccacgctcacgcccggacaacag
gtgatggtttcctggtcgcgtgatgtgatggtgccgctggttgaggagaggtga
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