Shigella sp. PAMC 28760: A0259_11305
Help
Entry
A0259_11305 CDS
T04390
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shq02000
]
A0259_11305
Transporters [BR:
shq02000
]
Other transporters
Pores ion channels [TC:
1
]
A0259_11305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMR23171
LinkDB
All DBs
Position
complement(2255153..2257255)
Genome browser
AA seq
700 aa
AA seq
DB search
MKIFSVRQTVLPALLALSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATP
RINLSESLTSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQG
QTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYG
LKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFN
SVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMY
AGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYEN
MSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDADVRYS
SVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELS
YRADGQSGMNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYK
NAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFA
SIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVD
NLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttttccgtccgacagaccgttttgcccgcactacttgccctttcccccgtt
gtttttgccgctgatgaacaaaccatgattgtcagtgccgcaccgcaggtggtttccgag
ctggatacgccagcagcagtaagcgtggtggatggcgaggagatgcgcctggcaacaccg
cgcattaacttgtccgaatcactgaccagcgtgcctggtttgcaggtacaaaatcggcag
aactatgcgcaagatttacagctgtcgattcgcggatttggctcccgctccacttacgga
attcgcggtattcgcctgtatgtggacggtattcccgccaccatgcccgacgggcaaggg
caaacatccaacatcgatttaagcagtgtgcaaaatgtggaagtgctgcgtggccccttt
tctgccctgtatggcaacgcgtctggcggtgtaatgaatgtcaccacccagaccggacaa
cagccaccaaccattgaagccagtagttactacggcagttttggcagctggcgctatggg
ctgaaagcaacgggcgcaacgggagacggcacacaacccggcgatgttgattacaccgtc
tcaaccacgcgttttacgacccacggctatcgtgaccatagtggcgcacagaaaaattta
gccaatgccaaactgggcgtacgcattgatgaagccagcaaattaagcctgattttcaat
agtgtggatatcaaagcagatgacccaggtgggctaaccaaagcagaatggaaggcgaat
ccacaacaagcgcctcgtgcagaacagtacgacacgcgaaaaaccatcaagcaaactcag
gctgggttgcgctatgaacgtagcctgagttcgcgggatgatatgagtgtgatgatgtat
gccggagagcgagaaacgacccagtaccagtcaatacccatggcaccacaacttaacccg
tcacatgcgggcggcgtgattaccctgcaacgccattaccagggaatagacagccgctgg
acacaccgtggtgaactgggcgttccggtcacgttcactaccggcctgaactacgaaaac
atgagtgaaaaccgcaagggctacaataacttccgcctgaatagcggcatgccggagtac
gggcaaaaaggtgagttgcgtcgcgacgaacgcaatctgatgtggaacatcgatccctat
ttacagacgcagtggcagctgagcgaaaaactgtcgctggatgctgacgtgcgctacagc
tccgtgtggtttgattccaacgaccattacgttactccgggtaacggcgatgacagcggt
gatgccagttatcataaatggctacctgccggttcgttaaaatatgcaatgaccgatgcc
tggaatatctatctggcagccgggcgaggttttgaaacgccgacgattaatgagctgtct
tatcgtgctgatgggcaaagcggtatgaacttaggtttaaaaccatccaccaacgataca
attgagatcggcagtaaaacgcgtattggtgatgggctgcttagtctcgcattgtttcag
accgacactgatgatgaaattgttgtcgatagcagtagcggtgggcgtacgacttacaaa
aatgccggaaagacccgtcgtcaaggcgctgaactggcatgggatcaacgtttcgcagga
gattttcgcgtaaacgcgtcctggacctggcttgatgcgacctatcgcagcaatgtttgc
aatgaacaggattgtaacggtaatcggatgccagggatcgcccgtaatatgggctttgcg
tcgataggttatgtaccggaagatggttggtatgcaggcacggaagcgcgttatatgggc
gatattatggcagatgatgaaaatacggcaaaagcgccgtcttatactctcgtcggctta
ttcaccgggtataaatacaattaccacaatttaactgtggatttatttggtcgtgtcgat
aatttattcgataaagaatacgttggttctgtcattgtcaatgagtcaaacgggcgatat
tacgaaccttcgcccggacgaaattatggtgtcggcatgaatattgcgtggagatttgag
taa
DBGET
integrated database retrieval system
