Shigella sp. PAMC 28760: A0259_11625
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Entry
A0259_11625 CDS
T04390
Name
(GenBank) autoinducer 2-binding protein lsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq02010
ABC transporters
shq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A0259_11625
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A0259_11625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shq02000
]
A0259_11625
Transporters [BR:
shq02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
A0259_11625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF6848
Motif
Other DBs
NCBI-ProteinID:
AMR23229
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All DBs
Position
2333253..2334275
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AA seq
340 aa
AA seq
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MTLHRFKKIALLSVLGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV
TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK
PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK
EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV
AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG
QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcatcgctttaagaaaatcgccttacttagcgttcttggcattgccgcaatc
tctatgaatgtgcaggccgcagagcgtattgcatttattcccaaactggttggcgtggga
ttttttaccagcggtggcaacggcgcacaacaagcgggtaaagagctgggcgttgatgtg
acctacgacgggccgacagaacccagtgtttctggtcaggtacagttgattaataacttc
gtcaatcaaggttataacgccattatcgtttctgcggtttcgcctgatggcttgtgtccg
gcactgaaacgcgccatgcaacgtggtgtgagagtgctgacctgggactctgatactaaa
ccggagtgccgctcttactacattaatcagggaacgcccgcccagttgggaggtatgttg
gtggatatggcggcgcgtcaggtgaataaagacaaagccaaagtcgcgtttttctactca
agccccaccgttacggaccaaaaccagtgggtgaaagaagcgaaagcgaaaatcgccaaa
gagcatcctggctgggaaattgtcactacgcagtttggctataacgatgccactaaatca
ttacaaaccgcagaaggaatattaaaagcgtatagcgatctcgacgccattatcgccccc
gatgccaacgccctgcccgctgccgcacaagccgcagaaaacttgaaaaatgacaaagta
gcgattgtcggattcagtacgccaaacgtgatgcgtccatatgtggaacgcggcacggtg
aaagaatttggcctgtgggatgtggttcagcaaggcaaaatttcagtgtatgtcgcggat
gcattattgaaaaaaggatcaatgaaaacgggcgacaagctggatatccagggcgtaggt
caggttgaagtctcgccaaatagcgttcagggctatgactacgaagcggatggtaatggc
atcgtactgttaccggagcgcgtgatattcaacaaagagaatatcggcaaatacgatttc
tga
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