Shigella sp. PAMC 28760: A0259_13335
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Entry
A0259_13335 CDS
T04390
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A0259_13335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shq03400
]
A0259_13335
DNA repair and recombination proteins [BR:
shq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A0259_13335
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AMR23545
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All DBs
Position
2651971..2652633
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AA seq
220 aa
AA seq
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MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAIAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT
RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR
GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcattatcgatacagaaacctgcggtttgcagggagggatcgttgagattgcc
tctgttgatgtcattgacggaaaaatcgtcaaccccatgagccacctggtgcgccccgat
cgtcctattagtccacaagcgattgcgattcatcgcatcaccgaagccatggtcgccgat
aaaccgtggattgaagatgtgatcccacactattacggcagtgaatggtatgtcgcgcac
aacgccagctttgaccgccgcgtactgcctgagatgcccggtgagtggatttgcaccatg
aaactggcccgtcgcttgtggccaggaatcaagtacagcaatatggcgttatataaaaca
cgcaagctcaatgtacagacgccgccgggcctgcatcatcaccgcgcgttgtatgactgt
tatatcaccgccgcgttgcttatcgatattatgaacacctccggctggacggcagaacag
atggccgatatcaccggacgtccgtcgttgatgacgaccttcacctttggcaaataccgt
ggcaaagcggtttccgacgttgccgaacgcgatccgggctatctgcgctggttatttaat
aacctggacagcatgagcccggagctgcgtttaacactgaaacattatctggaaaatact
taa
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