Shigella sp. PAMC 28760: A0259_18620
Help
Entry
A0259_18620 CDS
T04390
Name
(GenBank) short-chain dehydrogenase
KO
K28561
ceramide reductase [EC:1.-.-.-]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00600
Sphingolipid metabolism
shq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
A0259_18620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
NmrA
NAD_binding_10
NAD_binding_4
3Beta_HSD
GDP_Man_Dehyd
Polysacc_synt_2
RmlD_sub_bind
adh_short
Sacchrp_dh_NADP
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
AMR24518
LinkDB
All DBs
Position
3772645..3773559
Genome browser
AA seq
304 aa
AA seq
DB search
MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSEL
VAGASVVVHCAGQVRGHKEEIFTRCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELS
WYAKSKYVAEQRLAAMADEITLGVFRPTAVYGPGDKELKPLFDWMLRGLLPRLGAPDTQL
SFLHVTDFAQAVGQWLSAETIQTQTYELCDGVAGGYDWQRVQQLAADARCGSVRMVGIPL
PVLTGLADISTALSRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEHALR
NGLF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaactgtcgcggtgacgggcgctaccgggtttatcggtaaatatattatcgat
aacctgctcgcccgcggctttcacgttcgcgcattgacgcgtactgcccgcgctcacgtc
aatgataatctcacctgggtgcgcggttcgctggaagatactcattcacttagcgagctg
gttgccggagccagcgtagtggtccattgcgccgggcaagtgcgcgggcacaaagaagag
attttcacccgctgtaacgttgacggcagcctgcgcctgatgcaagcagcaaaagagagc
ggcttttgccaacgttttctgtttatctcttcgctggcggcgcgccatcccgagctctcc
tggtatgcaaaatccaaatacgtcgccgagcaacgactggcagcaatggcggacgaaatt
acgctgggcgtttttcgcccgacagccgtgtatggtcccggcgataaagagttaaaaccg
ctgtttgactggatgctgcgcggcctgctgccacgacttggtgcgccagatacacagctc
tcttttctgcacgtcaccgatttcgcgcaagcagtgggtcagtggttaagcgccgaaact
atacagacgcaaacctatgaattatgcgatggcgtcgccggcggctatgactggcaacgc
gtacagcaacttgccgccgacgcccgttgcggttccgtgcgaatggttggcattcctctg
ccggtactcaccggccttgcggatatcagtaccgcgttgagtcgcctggcaggtaaagaa
cctatgctgacccgctcgaaaattcgtgaattaacccacgccgactggtcggcaagtaat
aaccgtatttctgaagatattaattggtttcccgggattagcctggaacacgcattacgc
aacgggctattttga
DBGET
integrated database retrieval system
