Shigella sp. PAMC 28760: A0259_19580
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Entry
A0259_19580 CDS
T04390
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shq03016
]
A0259_19580 (truB)
Enzymes [BR:
shq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A0259_19580 (truB)
Transfer RNA biogenesis [BR:
shq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A0259_19580 (truB)
Prokaryotic type
A0259_19580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMR24698
LinkDB
All DBs
Position
complement(3960458..3961402)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaacct
cagggtatgtccagcaacgatgcgctgcaaaaagtgaaacgtatatataacgccaaccgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccgatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacagatcgttgaagaacgtccg
gtaacctttagcgcagagcagctggcagcggcactggatactttccgtggcgatatcgaa
cagatcccttcgatgtattcagcactgaaatatcagggcaaaaaactgtacgaatatgcg
cgtcagggcattgaagttccgcgtgaagcgcgtccgattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctgggtgaaaaactcggctgtggcgcgcatgttatttacctg
cgccgtctggcggtaagtaaatatccggttgaacggatggtgaccctggagcacctgcgt
gaacttgttgagcaagctgaacagcaggatattccagccgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactatccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatctggtgcgccactggaaggactg
gttcgcgtcacggaaggtgagaacggcaaatttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
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integrated database retrieval system
