Shigella sp. PAMC 28760: A0259_20950
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Entry
A0259_20950 CDS
T04390
Name
(GenBank) transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
shq
Shigella sp. PAMC 28760
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shq03000
]
A0259_20950
Transcription factors [BR:
shq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A0259_20950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
HTH_23
DUF2701
Motif
Other DBs
NCBI-ProteinID:
AMR24951
LinkDB
All DBs
Position
complement(4221006..4222001)
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AA seq
331 aa
AA seq
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MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN
ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNI
DGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGH
RHIAYLGARLDERTIIKQKGYEQAMLDADLVPYSVMVEQSSSYSSGIELIRQARREYPQL
DGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI
GAERLLARIRGESVTPKMLDLGFTLSPGGSI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaagacccgtacttcaggatgtggctgaccgtgtaggcgtgaccaaaatg
acggtcagccgctttttgcgtaacccggagcaggtttccgtcgctctacgcggcaagatt
gccgccgctcttgatgaactgggttatattcccaatcgtgcgcccgatatcctctctaac
gccaccagccgggcgattggcgtcctgttaccttctctcaccaaccaggttttcgcggaa
gtattacgcggaatcgaaagcgtcaccgacgcgcacggttatcaaaccatgctggcgcac
tacggttataaaccggaaatggagcaagaacgcctcgaatccatgctctcatggaatatc
gatggactgatcctcaccgaacgtactcacacgccacgcaccttaaagatgattgaagtg
gcggggatcccggtggtggagttgatggacagcaagtcgccgtgcctcgatattgccgtc
ggttttgataactttgaagcggcacgccagatgaccaccgccattattgctcgcgggcat
cgccacattgcttatctcggcgcacgtctcgacgaacgtactatcatcaaacagaaggga
tacgaacaggcgatgctggatgcagacctggtgccatatagcgtgatggttgagcaatct
tcttcttactcttccggtattgaactgattcgccaggcgaggcgggaatatccgcagctg
gatggcgtgttctgtactaatgatgacctggcggtcggcgcggcgtttgaatgccagcgt
ctggggttaaaagttcctgacgatatggcgattgccggtttccacggtcatgacattggt
caggtgatggaaccacggttggcgagcgtactgacgccgcgtgagcggatgggcagtatt
ggcgctgaacgcctgctggcgcgtattcgtggcgaatctgtgacaccgaaaatgttagat
ttaggtttcaccttgtcaccgggcggatctatttaa
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