KEGG   Sarcophilus harrisii (Tasmanian devil): 100913322
Entry
100913322         CDS       T02286                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082  ATP-dependent chromatin remodeling
shr03083  Polycomb repressive complex
shr04110  Cell cycle
shr04213  Longevity regulating pathway - multiple species
shr04330  Notch signaling pathway
shr04350  TGF-beta signaling pathway
shr04613  Neutrophil extracellular trap formation
shr04919  Thyroid hormone signaling pathway
shr05016  Huntington disease
shr05031  Amphetamine addiction
shr05034  Alcoholism
shr05165  Human papillomavirus infection
shr05169  Epstein-Barr virus infection
shr05200  Pathways in cancer
shr05202  Transcriptional misregulation in cancer
shr05203  Viral carcinogenesis
shr05206  MicroRNAs in cancer
shr05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100913322 (HDAC1)
   03083 Polycomb repressive complex
    100913322 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100913322 (HDAC1)
   04350 TGF-beta signaling pathway
    100913322 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100913322 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100913322 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100913322 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    100913322 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100913322 (HDAC1)
   05202 Transcriptional misregulation in cancer
    100913322 (HDAC1)
   05206 MicroRNAs in cancer
    100913322 (HDAC1)
   05203 Viral carcinogenesis
    100913322 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    100913322 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100913322 (HDAC1)
   05165 Human papillomavirus infection
    100913322 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    100913322 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    100913322 (HDAC1)
   05034 Alcoholism
    100913322 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shr03036]
    100913322 (HDAC1)
Enzymes [BR:shr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100913322 (HDAC1)
Chromosome and associated proteins [BR:shr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100913322 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     100913322 (HDAC1)
    BRAF-HDAC complex
     100913322 (HDAC1)
    REST complex
     100913322 (HDAC1)
    SHIP complex
     100913322 (HDAC1)
    MiDAC complex
     100913322 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100913322 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100913322 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    100913322 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100913322
NCBI-ProteinID: XP_031818145
Ensembl: ENSSHAG00000010097
UniProt: A0A7N4V3R1
LinkDB
Position
3:546635837..546661324
AA seq 482 aa
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAH
ADEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDGIQEDSGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKMEEEKDREPEEKKEAKEEEKTKEEKPEAKGVKEETK
SA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgctgactcagggcacgaagcggaaagtctgttactactacgacggtgatgttgga
aattactactatgggcagggccacccaatgaaacctcatcgaatccgaatgactcacaac
ttgctacttaactatggactctaccggaagatggaaatatatcggccccacaaagcccat
gcggatgagatgaccaagtaccacagtgatgactacattaagtttttgcgctctatccgt
cctgataatatgtcggagtacagcaagcagatgcagagatttaatgttggtgaagactgt
ccagtgtttgacggcctgtttgagttttgccagttatccaccggtggatctgtagcaagt
gcagtgaagcttaacaaacagcagacagacattgctgtgaactgggctgggggcctgcac
catgctaagaagtctgaagcttctggcttctgttatgtcaacgacattgtgttggccatc
ctggagctgttgaagtaccaccagagggtgctgtacattgacattgacattcaccatggc
gatggcgtggaagaagctttctacaccacagatcgggtcatgacagtgtcctttcataag
tatggagagtactttccgggaacgggtgacctacgggacattggagctggcaaaggcaaa
tactatgctgtgaactacccgcttcgagatgggatcgatgatgagtcttatgaggccatt
tttaaaccagttatgtccaaggtgatggagacctttcagcccagtgcagtggtcttgcag
tgtggttctgattccctgtctggagaccgattaggttgtttcaaccttaccattaaaggt
catgccaaatgtgtagagtttgtcaagagctttaatctgcccatgctgatgctgggaggg
ggtggctacactatccgcaatgtagccaggtgctggacatatgagacagctgtggctttg
gatacagagatccctaatgaacttccctacaatgattattttgaatactttggaccggat
ttcaaacttcatatcagcccatctaacatgacaaaccagaatacaaatgagtacctggag
aagatcaagcagagattgtttgagaaccttcggatgttgcctcatgcccctggtgtccag
atgcaaccaattcctgaggatggcatacaggaagacagtggagatgaagatgaggaagat
cctgacaagcgcatttcaatatgctcttcagacaaaagaattgcatgtgaggaggagttt
tcagattcagatgaggaaggtgagggcggtcggaaaaactcttccaacttcaagaaagcc
aaaagggtcaaaatggaagaggagaaagatcgagagccagaggagaaaaaagaagcaaaa
gaggaggaaaaaacaaaggaagagaaacctgaagccaaaggggtgaaggaggaaaccaag
tctgcctga

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