Sarcophilus harrisii (Tasmanian devil): 100913344
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Entry
100913344 CDS
T02286
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X2
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100913344 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100913344 (RABGEF1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100913344 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
100913344 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
100913344
NCBI-ProteinID:
XP_012405281
Ensembl:
ENSSHAG00000003106
LinkDB
All DBs
Position
4:complement(441577848..441613224)
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AA seq
499 aa
AA seq
DB search
MVFFGRKMNLKSERRGIHVDQSELLCKKGCGYYGNLAWQGFCSKCWREEYHKARQRQIQE
DWELAERLQREEEEAFASSQSSQGAQSLTFSKFEGKKTNEKSRKVTTVKKFFSASSRGGP
KKAEIPEAKAASPSLHRQASLETDRASKEFIEFLKTFHKMGQEIYKQTKSFLEAMHHKRE
LSIEEQSEYAQDFYQNVAERLQTRGKVPPEKMEKAMDQIEKYVMTRLYKYVFCPETTDDE
KKDLAVQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACIT
KCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGED
GYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPKKQESERWAPNACLGVKQMYK
NLDLLSQLNERQERLMSQAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPSQPLAAIDS
ENVENDKLPPPLQPQVYAG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggtgttttttggaaggaagatgaacctgaagtctgaacgcagagggattcatgtggac
cagtcggaactcctgtgcaagaaaggatgtggttattatggcaacttggcttggcagggc
ttctgctccaagtgctggagagaagagtatcacaaagcccgacagcggcagattcaggag
gactgggagctggctgaacggctccagagggaggaagaagaagcctttgccagcagtcag
agcagccaaggggcccagtctctcaccttttccaaatttgagggaaagaaaaccaatgag
aagagtcgcaaggtgacaacggtgaaaaaattcttcagcgcctcctcccgaggtggcccc
aaaaaggcagagattccggaggcaaaagctgcaagcccttcccttcaccggcaggccagc
ctggagacggacagggcgtccaaggagttcatagaatttcttaagaccttccacaaaatg
ggccaagaaatctataagcagaccaagagctttttggaagccatgcatcacaaacgggag
ctgagtattgaggagcagtcggagtacgcccaggacttttaccagaatgtggccgagaga
ctgcagacccgggggaaagtgcccccagagaagatggagaaggctatggatcagattgag
aagtacgtcatgacacgcctgtacaagtatgtgttttgtccggaaactactgacgatgag
aagaaggatctggctgttcaaaaacggatcagagccttacactgggttactccacagatg
ctttgtgtccctgttaatgaagaaatcccagaagtctctgatatggtcgtaaaagccatt
acagacattattgagatggattccaagcgtgtcccccgagacaagctggcctgcatcacc
aaatgcagcaaacacatcttcaacgctattaagatcaccaagaacgagccagcctcagct
gatgacttcttacccaccctcatctacattgtcctgaagggtaaccccccacgactgcag
tccaacatccagtatattacccgtttctgtaatccaagccgactgatgactggggaagat
ggctactactttaccaatttgtgttgcgcggtggctttcatcgagaagctggacgctcag
tctttgaatttaagtcaggaggactttgatcgctacatgtctggccagacttctccaaag
aagcaggagtctgagcgctgggctcccaatgcatgcctaggggtcaaacagatgtataag
aacttagatcttctctctcaactgaatgagcgacaagaaaggctcatgagccaggccaag
aagctggaaaaagacctcatcgactggactgatgggattgcgaaggaggttcaggacatc
gtggagaagtatcccctggaaatcaagcccccaagccaacccctagcagccattgactcg
gagaatgtcgaaaacgacaagctccctcctcccctgcagcctcaggtctatgcaggatga
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