Sarcophilus harrisii (Tasmanian devil): 100913563
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Entry
100913563 CDS
T02286
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100913563 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100913563 (RBM22)
Spliceosome [BR:
shr03041
]
Complex B
Other components
Prp19-related factors
100913563 (RBM22)
Complex C
100913563 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
100913563
NCBI-ProteinID:
XP_003756761
Ensembl:
ENSSHAG00000017734
UniProt:
G3WZQ9
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All DBs
Position
2:382570717..382589700
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AA seq
420 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSFKDDMPKSDVNKEYYTQN
VEREISNSDGTRPVGVLGKATATSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEKEGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctctgggctccaacacctacaacaggcagaactgggaggacgcggacttc
cctattctgtgtcagacgtgccttggagaaaatccttacatccggatgaccaaagaaaaa
tatggaaaagaatgcaaaatttgtgccaggccgttcacagtgttccgctggtgccccggt
gttcgcatgcgttttaagaagactgaagtgtgccaaacctgcagcaagctaaaaaatgta
tgtcagacctgccttttggacctagaatatggcttacctattcaggtccgtgatgcagga
ctatcctttaaggatgacatgcctaaatctgatgtgaacaaagaatattatacccagaat
gttgagcgagagatttctaactctgatggaactcggccagttggtgttcttggaaaagct
acagctacaagtgacatgctgcttaaattggctcggacgaccccttattataaacggaat
cgtcctcacatttgttccttctgggtaaaaggagaatgtaaaagaggagaggagtgtcca
tacagacatgagaagcctacagaccctgatgatcctcttgccgatcagaacatcaaagat
cgatattatggcattaatgatcctgtggcagataagcttctaaaacgggcttcaacaatg
cctcgcctggaccctccagatgataagaccataaccactctgtatgttggtggtctggga
gatacaattagtgagacggatctcagaaatcacttttaccagtttggtgagatccgaaca
ataacagttgtacaaagacaacaatgcgctttcatccagtttgctacaaggcaagctgca
gagatggctgctgagaagtccttcaataaactgattgtaaatgggcgcaggcttaatgtg
aaatggggaagatctcaagcagccagaggaaaagaaaaagaaaaagaaggaaccacagac
tctggaattaagctggagcctgtcccaggacttcctggagctcttcctcctcctccagca
gctgaagaagaagcctctgccaattattttaatctccctcccagtggtcctccagccgtg
gttaatattgccctgccgccacctcctggcattgcacctcctcccccaccaggttttgga
ccacacatgttccacccgatgggaccaccacctcccttcatgcgagctccaggacccatc
cactatccttctcaagatccccagaggatgggggctcatgcaggaaaacacagcagtccc
taa
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