KEGG   Sarcophilus harrisii (Tasmanian devil): 100913743
Entry
100913743         CDS       T02286                                 
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040  Spliceosome
shr05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100913743 (SNRPD1)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100913743 (SNRPD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shr03041]
    100913743 (SNRPD1)
   03032 DNA replication proteins [BR:shr03032]
    100913743 (SNRPD1)
Spliceosome [BR:shr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    100913743 (SNRPD1)
  U2 snRNP components
    100913743 (SNRPD1)
 Complex B
  U1 snRNP components
    100913743 (SNRPD1)
  U4/U6.U5 tri-snRNP components
    100913743 (SNRPD1)
 Complex C
  U2 snRNP components
    100913743 (SNRPD1)
DNA replication proteins [BR:shr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     100913743 (SNRPD1)
SSDB
Motif
Pfam: LSM EBNA2_Core YomU_Tube Gemin7 Hfq AAA_RNF213_3 Phage_Hfq SM-ATX API5
Other DBs
NCBI-GeneID: 100913743
NCBI-ProteinID: XP_003760058
Ensembl: ENSSHAG00000011791
UniProt: G3WED5
LinkDB
Position
1:complement(493621112..493632994)
AA seq 119 aa
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagctcgtgagatttttgatgaaattgagtcatgaaactgtaaccattgaattgaag
aatggaacacaagtgcatggaacaatcacaggtgtggatgtcagtatgaatacacatctt
aaagctgtgaaaatgacccttaagaacagagagcctgtacaattggaaacactgagcata
cgaggaaataacattcggtacttcatcctcccagacagcttacctctggatactttactt
gtggacgttgaaccaaaggtgaaatctaagaaaagggaagctgttgcaggaagaggccga
ggtcggggtagaggacgaggacgtggccgtggcagaggaagagggggtcccagacgataa

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