Sarcophilus harrisii (Tasmanian devil): 100913766
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Entry
100913766 CDS
T02286
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100913766 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100913766 (PDS5B)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100913766 (PDS5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
100913766
NCBI-ProteinID:
XP_031816572
Ensembl:
ENSSHAG00000012281
LinkDB
All DBs
Position
3:complement(431974233..432185086)
Genome browser
AA seq
1486 aa
AA seq
DB search
MKKRGKKSSAKLTSILNKSEIIFSVAPHLQQGVENISIMAHSKTRANDGKITYPPGVKEI
SDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVAC
CLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYN
ICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVN
LVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISDLSEHVFDLILEL
YNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRF
NDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDI
LLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQSEAGKEAAKQISWIKDKLLH
IYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDLNAVKALNEMWKCQNLL
RHQVKDLLDLIKQPKTDASGKAIFSKVMIITRNLPDPGKAQDFMKKFTQVLEDDEKIRNQ
LEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEMIKFLLERIAPVHIDTESISALI
KQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDE
KVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKKGPPRQAKYAIHCIHAIFSSKET
QFAQIFEPLHKSLDPSNLEHLITPLVSIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDR
LPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDG
DLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVF
AQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEK
LLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFILEILMAKNENNSHAFIRK
MVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPD
KNFSNTKNYLPPEMKSFFTPGKPKTANVLGAVNKPLSSAGKQSQSKSSRMETVSNASSSS
NPSSPGRIKGRLDSSEMDHSENEDFSMSSPMPGKKSDKRDDSDLSELEKPRSRKKTPVTD
AEEKLGMDDLTKLVQEQKPKGSQRGRKRGTAMSDSDEQQWPEEKRLKEDPLENEDEQNSP
PKKGRRGRPPKAVGSGTPKEEPAIKTSKRGGRKKPGPPAAEEEEEEERQSENMEQKQKGR
QHRTSRRAQQSRAESSESSAVESTQSTPQKRRGRPPKTPSPSQPKKNVRTGRSKQASSKE
NESSEEMDVFQSSSPVNDDIPQEEIMEEEEVSTITVRRRTSKRERR
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagggggaaaaaaagttcagcaaaactcaccagcatattgaacaagtctgaa
attatattcagtgtcgccccacatctgcaacaaggggttgaaaatatttcaatcatggct
cattcaaagacaagggccaatgatggaaaaattacttatcctcctggcgtcaaagagatc
tcagacaaaatatctaaagaggagatggtgagacgattaaagatggttgtaaaaactttc
atggatatggaccaggactcggaagaagaaaaggagctgtatctaaaccttgctttacac
cttgcttcagattttttcctcaagcatcctgataaagatgttcgcttactggtggcatgt
tgtcttgctgatatatttaggatttatgctcctgaagcaccttatacttcaccagacaaa
ctgaaggatatatttatgtttataacaagacaattgaaaggattagaagatacaaaaagt
ccgcagttcaatagatatttttatttacttgagaacattgcttgggtcaagtcctataac
atatgctttgaattagaagatagcaatgaaattttcacgcagctttataggactttgttt
tcagtcataaacaatggccacaatcaaaaagttcatatgcacatggtggatctgatgagc
tctattatttgtgagggagatactgtttctcaggagcttttggatacagttctagtaaat
ctggtgcctgcccacaagaatttaaacaaacaagcatatgacctggccaaggctttactg
aagagaacagctcaagctattgaaccgtatattactaatttttttaatcaggttcttatg
cttggaaaaacatctatcagtgatctatcagagcacgtttttgacttaatactggaactc
tacaatatcgacagtcatttgttactatctgttttaccacagcttgaatttaaactgaag
agcaatgacaatgaagaacggctgcaagttgttaaactgctagcaaaaatgtttggggca
aaggattcagaattggcatctcaaaataaaccactttggcagtgctatttgggaaggttt
aatgatattcatgtacctatacggcttgaatgtgtgaaatttgccagccattgccttatg
aaccatcctgatttggcaaaggatttaacagaatatcttaaagtgagatcacatgatcct
gaagaagccattagacatgatgttattgtatctatagttacagcagctaaaaaagatatt
ctacttgttaatgatcacttacttaattttgtgcgagaacgaacattagacaaacggtgg
cgagtaagaaaagaagccatgatgggacttgcccaaatttacaagaaatattcgttgcaa
tcagaggctggaaaggaagctgcaaaacaaatttcatggatcaaggacaaattactacat
atatattatcaaaacagtattgatgaccggttgcttgttgaacgcatctttgctcaatac
atggttcctcacaatttggaaactacagaacgaatgaaatgtttatattacctgtatgct
acattggacttaaatgctgtgaaagccttgaatgaaatgtggaaatgtcagaaccttctc
cggcatcaagtaaaggatttgctagatttaattaaacagcccaaaacagatgccagtggt
aaagccatattttcaaaagtgatgataattacaagaaatttgcctgatcctggtaaggct
caggattttatgaaaaaattcacacaagtgttagaagatgatgagaaaataagaaaccag
ttagaaatgcttgttagtccaacatgttcctgtaagcaggctgaaggatgtgtgcgtgaa
ataaccaagaagttgggcaaccccaaacaacctacaaatccttttctggaaatgattaaa
ttcctcctggagaggatagctccagtgcatatagatactgaatctataagtgctcttatt
aagcaagtgaacaagtcaatagatggaacagcagatgatgaagatgagggtgttccaact
gatcaagcaatcagggcaggccttgaattgcttaaggtactctcatttacacatcctatc
tcatttcattcggcggaaacttttgaatctcttctggcttgcctaaaaatggatgatgaa
aaagtagcagaagctgcattacaaattttcaaaaatacaggaagtaaaattgaagaagac
ttcccacatatcagatcggcattgcttccagttctacatcacaaagctaaaaaaggacct
ccacgtcaagccaaatatgccattcactgtatccatgcaatattttccagtaaagagaca
cagtttgcacagatatttgagccactgcataaaagcctagacccaagcaaccttgaacat
ctcataacaccattggtttctattggtcacatagctcttcttgcaccagatcaatttgct
gctcctttgaaatctttggtagctactttcatcgtaaaagatcttcttatgaatgaccgg
cttccagggaaaaagacaactaagctgtgggttcctgatgaagaagtttctcctgagaca
ctagttaaaattcaagccattaaaatgatggtgcgatggctgttaggaatgaaaaacaat
cacagcaaatcaggaacttctacactgagattattaacaacaatattgcatagcgatgga
gacttaacagaacagggcaaaattagtaaaccagatatgtcgcgtctgagactggctgct
ggaagtgcgattgtgaagttggcccaagaaccttgttatcatgaaatcatcacattagaa
caatatcagttatgtgctttagctatcaatgatgaatgctaccaagtaagacaagtgttt
gctcagaaacttcacaagggcctttccagattacggttaccacttgaatacatggcaatc
tgtgcactgtgtgccaaagacccagtgaaagagagaagagcacatgccaggcagtgtctg
gtgaaaaatataaatgtgagacgagaatatctgaagcaacatgcagcagttagtgaaaaa
ttattatcactcttaccagaatatgttgtcccttatactattcatcttttggcacatgat
ccagattacgtgaaagtccaggatattgaacaacttaaagatgtaaaagaatgtctctgg
tttatccttgaaatcttaatggctaaaaatgaaaataacagtcatgcctttatccgaaag
atggtagaaaatattaaacaaacaaaagatgcccaaggaccagatgatgccaaaatgaat
gaaaaactgtacacagtgtgtgatgtggcaatgaatatcatcatgtcgaagagtaccacg
tatagtttggagtctccaaaagacccagtacttccagcacgatttttcactcaacctgac
aagaactttagtaacaccaaaaattatctgcctccagaaatgaaatccttcttcactcca
ggaaagcctaaaacagccaatgttcttggagctgttaataagcctctttcatcagcaggc
aagcaatctcagtctaaatcttcaaggatggagactgtgagcaatgcaagtagcagctca
aatccaagttctccaggaagaattaaaggaaggcttgacagttctgaaatggatcatagc
gaaaacgaagatttctcaatgtcttcacccatgccaggaaaaaaaagtgacaagagagac
gactctgatctttctgaacttgagaagcccaggagtcgaaagaagacacctgttacagat
gcagaagagaaattaggtatggatgacttaaccaaattggttcaggaacagaaaccaaag
gggagtcagcgagggaggaaaagaggcacagctatgtctgattctgatgaacagcagtgg
ccagaagagaagaggctcaaagaagatcccttagaaaatgaggatgaacagaatagtcct
cctaaaaagggcagaagagggcgaccccctaaagcagttggtagtggcactccaaaagaa
gagccagcaattaaaacatctaagagaggaggcaggaaaaaacctggacccccagcagca
gaggaggaagaagaagaagagagacagagtgaaaacatggaacagaaacaaaagggcaga
caacatagaacatctaggagagcacaacagagcagagcagaatcttctgaaagtagtgca
gttgaatccacacagtccacaccacagaaaagacgaggaagaccaccaaaaacgccatca
ccatcacaaccaaaaaaaaatgtccgcactggacgctccaaacaagcttctagtaaagaa
aatgaatcaagtgaagagatggatgtttttcagagtagctctcctgtcaatgatgacatt
ccacaagaagaaataatggaggaagaggaagtttctacaatcactgtacggcggcgaacc
tctaaaagggaaagacgatga
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