Sarcophilus harrisii (Tasmanian devil): 100913825
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Entry
100913825 CDS
T02286
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100913825
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100913825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
InlK_D3
Motif
Other DBs
NCBI-GeneID:
100913825
NCBI-ProteinID:
XP_003756687
Ensembl:
ENSSHAG00000007800
LinkDB
All DBs
Position
2:373937063..373940947
Genome browser
AA seq
797 aa
AA seq
DB search
MEQEWSMILQQRQVLFFFVLLCVAGAASELKQFSVVEERERGSFVANVAKALGLEVGMLS
NRRARVVFKENKEYLQLNRRTGDLLLREKLDREELCGPADPCVLPFQILLENPFQIVPAE
LMVEDINDHSPVFLDTETVLKIPESTSPGTVFVLENAQDLDIGSNSLENYTINPNSLFHI
QIRDSSEGKRYPELVLDKTLDREEKSEVTLTLTAVDGGVPPRSGTAQVRILVVDINDNAP
VFAQLRYEVQIPENSSIGSKVVTVSATDLDAGNYGEISYTFLHASENIRKTFHLKEELGE
LYLKGKVDFESTQSYTINIQATDGGGLSAECTVIVQVMDLNDNPPELTISSLTSPIPENS
PETVVAVFRVSDLDSGENGKMVCSIQDDLPFTLKPSIENYYTLVTEGALDREYKDEYNIT
ITVIDLGSPRLKSEYNLTVLISDVNDNSPVFTQRTYKLYLQENNGPALHIGSVSASDRDS
GINAKVTYSLLPPESGELPLFSYISINSDNGHLYALRSLDYEAIQTFQFTVRAADGGSPS
LSSQVLVQIVVQDENDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDRDWGQNS
WLSYQLLKATDPGLFTLWAHNGEVHTARPISDKDAIKQRLLVLVKDNGQPPLSTMATINV
FLVDGFSEPYLQLPDGPKEQVQTDSLTTYLIISLTSVSFLFLASIITFITIHLWKRKRDA
AYGSHFNPNGPFPDHLVNVSGTGTLSQRYQYEVCLTSGSGISEFKFLKPIIPSLSPAEGS
GQNSIENPHLRNSFCFT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaatggtcaatgattctacaacaaaggcaagttctttttttctttgttcta
ctctgtgtcgctggagcagcctcagagctaaagcagttttctgtggtggaggagagggag
agaggttcctttgtggccaatgtggcaaaggccctggggctggaggtagggatgttgtca
aatcgccgggctagagtcgttttcaaagagaacaaagagtatttgcagctgaaccgtaga
actggggatctgctcttgagagagaaactggatcgggaggagctgtgcggccccgctgat
ccctgtgtgctcccttttcaaatcctattggaaaacccctttcagattgttccagctgaa
ttaatggtagaagacattaatgaccattcaccagtgtttctagacactgagacagtatta
aaaatcccagagagcacttcccctggaacagtatttgtactagaaaatgcacaggattta
gacataggaagcaacagtctagagaactataccatcaatcccaactcgcttttccatatt
caaattcgagatagcagtgagggcaagcgatacccagagcttgtactcgataaaacactg
gatcgggaagagaagtctgaggtcactttaactctcactgcagtggatgggggagtccca
ccaaggtctggaactgcccaagtccgaatccttgtagttgatatcaatgacaacgcccca
gtgtttgctcagctgcgttatgaagttcaaatccctgagaacagttccattggatccaag
gttgtcacagtttctgccacagatttagatgcaggaaattatggagaaatatcttacaca
tttttgcatgcctctgaaaacattcgaaaaactttccaccttaaagaggaattaggagaa
ctttatttaaagggaaaagtggattttgagtcgactcaatcttacactataaatatccag
gccacagatggtgggggcctttcagcagaatgtactgttattgttcaggtgatggatctg
aatgacaatcctccggagctgacgatatcttcactgaccagccccatcccagagaattct
cctgagacagtggtagctgtcttcagagtttcagatctggattctggggaaaatggaaag
atggtttgctccattcaagatgaccttccttttaccttgaaaccttccattgaaaactac
tacacattggtaacagaaggagcactagacagagagtacaaggatgaatacaatatcact
attacagtaattgacttgggctccccaagactcaaatctgagtataatctcacagtgctt
atctccgatgtcaatgataactctccagtttttactcagagaacctacaaattgtacctt
caagagaacaatggtcctgccctccacattggcagtgtcagtgccagtgacagggactca
ggaatcaatgccaaagtcacctattctctgctgcctccagaatctggagaactgcccctc
ttctcctacatctccatcaattcagacaatggtcatctctatgctctgagatctctggat
tacgaagccatccaaactttccagttcactgtgagggcagctgatggtggttctccatca
ctgagtagccaagttctggttcagattgtggtacaggatgaaaatgataactctcccttt
gttctgtaccccttgcaaaatggcacagctccctgcaatgatttggtgcccagaactgca
gagccgggttacttggtgaccaaggtggtagctgtggatagagactgggggcagaattcc
tggctttcttatcagctgctcaaggccacagacccaggcctatttactttgtgggcccac
aatggggaagttcacacagcaagacccatcagtgacaaagatgccatcaagcagaggctc
ctggtgttggtaaaggacaatgggcaaccacctctgtccacaatggccacaataaatgta
ttcctggtagatggtttttcagagccctacctgcagttaccagatggacctaaggagcag
gtccaaactgattctcttaccacttacctaatcatttccctgacctctgtctcctttctc
ttccttgcttctattattaccttcattaccattcatctgtggaagaggaagagagatgct
gcttatggtagtcattttaatccaaatggccccttcccagatcacttggtgaatgtcagt
ggcacagggactttgtctcagagataccaatatgaagtttgcctgaccagtggctcaggg
atcagtgagtttaaatttctgaagcccattattcccagcctttcacctgctgagggaagt
gggcagaattctattgaaaacccacatttaagaaatagcttttgtttcacttaa
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