Sarcophilus harrisii (Tasmanian devil): 100913843
Help
Entry
100913843 CDS
T02286
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03420
Nucleotide excision repair
shr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100913843 (ERCC4)
03460 Fanconi anemia pathway
100913843 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shr03032
]
100913843 (ERCC4)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100913843 (ERCC4)
DNA replication proteins [BR:
shr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100913843 (ERCC4)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100913843 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
DUF4110
Motif
Other DBs
NCBI-GeneID:
100913843
NCBI-ProteinID:
XP_003761738
Ensembl:
ENSSHAG00000011596
UniProt:
G3WDR1
LinkDB
All DBs
Position
1:302138433..302172345
Genome browser
AA seq
919 aa
AA seq
DB search
MLHSPLDPEELPGSSGTGSSGAAMAPLLEYERQLVLELLETDGLVVCARGLGADRLLYHF
VRLHCHPGCLVLVLNTQPAEEEYFINQLKLEDVEHLPRRVTNEIASGSRYEVYTQGGVLF
VTSRILVVDFLTDRIPSDLITGILVYKAHRIIDSCQEAFILRLFRQKNKNGFIKAFSDNA
IAFDTGFCHVERVMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVAMTPAMLAIQTA
ILDILNACLKELKCYNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDL
KILRTLLQYLSQYDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHIPD
IRMNKKCKMTEKTDQEGQELKRELVLESNPKWEALTEVLKEIEIENNNSEALGGPGKVLI
CASDDRTCAQLREYLTIGAKTFLLKLYTKTFGKDKAGEVKMKFSKEDNSKGNLKSSKESK
VSKAKIRTSKKQRPTKKQELTLTQMVTKIEDEAEEVDYKEINNSQENCLKETGPEVFGVK
LSSDAAYGILKEPLTVIHPLLGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRAS
RPGKPMRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLV
REATSTYASTDTRKAGGQEKTNLQQSIIVDMREFRSELPSLLHRRGIDIEPITLEVGDYI
LTPEICVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTSRGSLHQ
EISSNDISSKLTLLTLHFPKLRILWCPSPHATAELFEELKQNRPQPDATTAMAITADTET
LPDSEKYNPGPQDFLLKMPGVNAKNCCSLMNHVKSIAELTTLSQDKLSSILGNAANAKQL
YDFIHASYTEVIAQGKVKK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactcgcccttggacccggaagagctacccggaagttccggtaccggctcctcg
ggggcggccatggcgccgcttctggagtacgagcggcagctggtgctggagctgctggaa
accgatgggctggtggtgtgtgcccgcgggctcggggccgacaggctcctctatcatttt
gtccggctgcactgccacccgggctgcctggtgctggtgctcaacacccagccggctgag
gaggaatattttatcaatcagctgaagttagaggatgttgaacaccttcctcggcgggtg
acaaatgaaattgcaagtggaagtagatatgaggtttatacccaaggaggtgtccttttt
gtaacaagtcgaattcttgtggtagatttcttgactgacagaattccttcagatttgatt
actggcattttggtctataaagctcacagaatcattgactcttgtcaggaagccttcata
ttgcgtctctttcgtcaaaaaaataaaaatggtttcattaaagctttctcagataatgca
attgcctttgatactggcttttgtcatgtggaaagagttatgagaaatctttttgtaaga
aaattgtacctgtggccaaggtttcatgtagcagttaactcgtttttagagcaacacaag
cctgaagtagttgaaatacatgttgccatgactcctgccatgcttgctatccagacagct
attctggacattttgaatgcatgtctgaaggaattaaagtgctacaatccatctcttgaa
gtagaagatttatctttagaaaatgctattggaaaaccttttgacaagacaattcgtcac
tatttagatcctttgtggcaccagcttggagcaaagactaagtctttggtacaagatttg
aaaatactacgaactttgttacagtatctctctcagtatgattgtgtcacatttcttaat
cttctggagtctttaagggcaactgagaaagcttttggccagaattcaggatggctgttt
cttgactctagtacttcaatgtttgtaaatgctcgagcaagagtttatcacattccagat
atcagaatgaacaaaaagtgcaaaatgactgaaaaaacagaccaagaaggccaagaattg
aaaagagaactggtactagaaagcaatcctaaatgggaagccctaactgaagtattaaaa
gaaattgaaatagaaaataacaatagtgaagctcttggtggtccaggaaaagtacttatt
tgtgcaagtgatgatcgaacatgtgcacagcttagagaatatctcactatcggagctaag
actttcttattgaagctatatacgaaaacctttggaaaggataaagctggagaagtaaag
atgaaattcagtaaagaagataattctaaaggaaacctgaaatctagcaaagaatccaaa
gtttcaaaagccaagatcaggacttccaaaaaacaaagacctacaaagaagcaagaattg
actttaactcagatggtaacaaagattgaggatgaagctgaggaagttgattataaagaa
ataaacaacagccaagaaaactgcctgaaggaaactggacctgaagtgtttggtgtgaaa
ttatcatctgatgcagcatatggcatcctgaaagaacccctcactgtcatccatccactt
ctgggttgtggtgacccctatgccctaaccagagtattacatgaagtggagccaagatat
gttgtcttatatgatgcagaactaacatttgttcgtcaacttgaaatttatagggcaagt
aggcctggaaagcctatgagggtctattttcttatctatggaggttcaactgaagaacag
cgctatcttactgctttacggaaagagaaagaggcttttgagaaactcattagagaaaaa
gcaagcatggttatccctgaagaaagagaagggagagatgaaacaaacttagacctggta
agagaagctacatcaacatatgcttctactgacactcgcaaagcaggtggtcaggaaaag
actaatttgcaacaaagtataattgtggacatgagagaatttcgaagtgaacttccatct
ctgcttcatcgtcgaggcattgacattgaaccaattacattagaagtaggagattacatc
ctaactccagaaatatgtgtcgagagaaaaagcatcagtgatttgattggttctttaaat
aacggtcgcctctatagtcagtgcatctccatgtctcgatattataagcgaccagtactt
ctgattgagtttgatcccagtaaacctttctctcttacttctcgaggttctctacatcag
gaaatttccagtaatgatattagttccaaactcactcttcttactcttcatttcccaaaa
cttcggatcctttggtgtccttccccccatgcaactgctgagttgtttgaggagttgaaa
cagaacaggccacaacctgatgcaacaacagccatggccatcacagcagatactgaaacc
cttcctgattcagaaaaatacaatcctggaccacaagacttcttattaaaaatgccaggt
gtcaatgccaaaaactgttgttccttaatgaatcatgtaaagagcattgcagaattaaca
actttgtcacaagataaactctctagtattcttggaaatgctgcaaatgctaagcagctt
tatgatttcattcatgcatcctatacagaagttattgctcagggaaaagttaaaaagtaa
DBGET
integrated database retrieval system
