Sarcophilus harrisii (Tasmanian devil): 100913898
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Entry
100913898 CDS
T02286
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100913898 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100913898 (MYO5C)
04131 Membrane trafficking [BR:
shr04131
]
100913898 (MYO5C)
03029 Mitochondrial biogenesis [BR:
shr03029
]
100913898 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100913898 (MYO5C)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100913898 (MYO5C)
mRNA cycle factors
P-body specific factors
100913898 (MYO5C)
Membrane trafficking [BR:
shr04131
]
Others
Actin-binding proteins
Myosins
100913898 (MYO5C)
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100913898 (MYO5C)
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100913898 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
100913898
NCBI-ProteinID:
XP_031811073
Ensembl:
ENSSHAG00000017425
UniProt:
G3WYP4
LinkDB
All DBs
Position
2:complement(503967897..504107822)
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDADEVWKSAEIAKDYKVGDKVLHLLLEDGSEQDYSVDPETLPPL
RNPDILVGENDLTALSYLHEPAVLHNLKIRFAESKLIYTYSGIILVAMNPYKELPIYGNA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDKRNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKHLKLVSAEEFNYTKMGGNTIIEGVNDR
ADMIETQKTFTLLGLKEDFQMDVFRILAAILHLGNVQITAMSNERSSVSEDDRHLNIFCE
LLNVDSSRVAQWLCNRKIITTSETVIKPMTRLQSLNARDALAKKIYSHLFDFIVERINRA
LQFSGKKHTFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEGI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENLLQKLYNNFVNKNVLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYEVLVEILRTSKFPLCASFFQENPGPPPPF
NSSITVKSAKQVVKPNNKNFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTQQELAFSDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCIIIQKHIRGWLQRKKFLRQR
KAAVTIQQYFRGQQTVRKAISATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAY
TRGFLARKKYQKMLKEHKAIILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENHGLVEKLTSLATTHASDMEKIQKLESELEKLAFQKRTCEEKGKKHKEVMEEKLAN
LQTYNKELEMQKEKIEKKLQEKTEEMKDKMEDLTKQLFDDVQKEERQRILLEKSFELKEQ
DYDKQIHSLKGEIKTLKEEKLQLQHQMEEEQIISNGLKGEVAQLTKQTKMISEFQKEIEL
LQTQKIDAEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKENYEKEIEALNFKVEHLSQEINHLQKLFREENDINDSIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLTEQTEKMKGKIEELSSQLHRNMEEEGIQ
RRTMEVQNEIHIKEKEKLIGTIREVQDANDHLKKKFETESEVKSSFKQEASRLNMENRDL
EEELDMKDRMIKKLQDQIKTLTKTIEKANEVHSSLETKEYVGMVEYKKEDEAKLVQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDASMLKSFMNITINGIKQVIKEHYEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKYNTPQQNKNCLMNFDLSEYRQILSDVAIRIYHQF
IFVMENNLQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYT
TMCQNGLDHELLKQTVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSTAKETLEPLSQAAWLLQVKKITDTDAKEIYDRCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDTGQLMLDTKYLFQVTFPFIPSPHALEMIEIPSSLKLGFLT
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggctgaattgtacacgcagtacaatagagtttggatacctgacgctgatgaa
gtttggaaatctgctgaaatagcaaaggactacaaagttggagataaagttcttcatctc
cttctagaagatggatctgaacaggattattctgttgatccagaaacacttccaccatta
cgaaatcctgatatacttgtaggagagaatgacctcacagcacttagttatcttcatgaa
cctgctgtcctccacaatctcaaaatacgttttgctgaatccaaacttatttatacctac
agtggaattattttagttgctatgaacccttacaaagagttgccaatctatggaaatgct
atcatccatgcttatagtgggcagaacatgggagatatggatccacacatatttgctgta
gcagaagaagcatataaacaaatggccagaaacaacaagaatcagtcgataattgtgagt
ggggagtcaggggctggaaagacagtgtcagcccgatatgctatgagatactttgccaca
gtcagcaaatcaagcagtaatgctcatgtggaagataaagtgctggcctccaatcccata
actgaggctgttggaaatgccaagactacccgaaatgataacagcagtcgctttggaaag
tatacagaaatcagctttgataaaaggaatcaaattataggagccaacatgagaacttat
cttttggaaaaatccagagttgtctttcaatcagaaaatgaacgcaattaccacattttt
tatcagctttgtgcctcagcgctgcagcctgaatttaaacaccttaaattagtgagtgca
gaagaatttaattatacaaaaatgggaggaaatactatcattgaaggagtgaatgacaga
gcagacatgatagaaactcagaagactttcacattgctaggtctgaaggaggattttcaa
atggatgtgtttaggatcctggctgccatacttcatcttggcaatgtgcagatcacagcc
atgagcaacgagagatcctcagtcagcgaagatgacagacatctgaacatattttgtgaa
ctcttaaatgtggacagtagcagagttgctcagtggctatgtaaccgtaaaatcatcact
acctcagagactgtaataaaacccatgactagacttcaatctctaaatgccagggacgcc
ctcgccaaaaagatctattctcatctgtttgacttcattgtggaaaggattaacagagca
ttgcagttttcgggcaagaaacatactttcattggggttttggatatttatggttttgaa
acctttgaagtaaacagctttgaacagttttgtattaattatgctaatgaaaaattacag
cagcagtttaatctgcatgtgttcaaacttgagcaagaagaatatatgaaggaaggtatt
ccttggactttgattgacttttatgataatcaaccagttattgatttgattgaagccaaa
atgggaatactggagctactagatgaagaatgcttgttaccacatggtactgatgaaaat
ttgctccaaaaactctacaataattttgtcaacaagaacgttttatttgaaaagcctaga
atgtcaaatacatcctttatcatccagcactttgctgataaggtagagtataaatgtgaa
ggattcctggagaagaacagagatacagtatatgaagtgttggttgaaatcctaagaaca
agcaagtttcctctctgtgctagttttttccaagaaaacccaggtcctcctcctcccttc
aattcatctatcacggtcaaatcagccaagcaagtagtcaagccaaataacaagaatttc
cggacaacagttggcaacaagttccgaagctctttgtatttgctgatggagacgctcaat
gcaaccacacctcactatgtgagatgcataaagccaaacgatgagaagctcccatttgag
tttgactccaaaagaattgttcagcagcttcgagcctgtggagttttagaaacaatccgc
atcagtgctcagagctacccttccaggtggacgtatattgagttttatagccgctatggc
gttctcatgactcagcaggaacttgccttcagtgataagaaggaggtttgcaaggtggtt
ttacacagattaatccaggactctaaccaatatcagtttggtaaaacaaaaattttcttc
agagcaggacaggtggcctatttagaaaagctccggttggataaactgaggcaaggatgt
attataatacaaaagcatatccgaggctggctccagagaaagaaatttctccggcagaga
aaagctgctgtgacaatacagcaatactttcgtggacagcaaactgtaaggaaagctatc
tctgccacagccttgaaagaagcatgggcagccataatccttcagaagcattgtcgaggt
tatctggtccgaaacctttaccagctcattcgcgtggccactataacaatacaggcgtat
acccggggattcctagcaaggaagaaatatcaaaagatgttgaaagagcacaaggctata
atccttcagaagtatgcccgagcctggctggccagacgcagattccagaacatccgacga
tttgtcctgaatatccagctttcttacagggtacaacgtttgcaaaaaaagctagaagat
cagaacaaagaaaaccatggattagtggaaaaattaaccagcttggccaccactcatgcc
agtgatatggagaagattcagaaacttgaatcagagcttgaaaaattggcctttcaaaag
cgaacatgtgaagagaaaggaaagaagcataaggaagttatggaagagaaattggcaaat
cttcagacatacaacaaagaattggaaatgcaaaaagagaagatagaaaagaagcttcaa
gaaaagactgaggagatgaaagataaaatggaagacctcacaaagcagctttttgatgat
gtgcaaaaagaagaaagacaaagaatactgcttgagaaaagttttgagctgaaagaacaa
gactatgacaaacagattcactctttgaagggagaaattaagactctaaaagaagaaaaa
ttgcaactccagcatcaaatggaggaagaacaaataatttccaatggcttgaaaggagag
gtggcccaactgaccaagcaaacaaagatgatctctgagttccagaaggagatagagcta
cttcagacacagaagatagatgcagagaaacatgtacagtcacaaaaacgagaaatgaga
gaaaaaatgtctgaaattactaaacaacttcttgaaagttatgatattgaagatgtgaga
agcagactttctgtggaagatttggaacatttaaatgaagatggagaactttggtttgca
tatgaaggcctaaagaaagcaacaagagtgttggagagccacttccagtctcagaaggag
aactatgaaaaagagattgaagcactgaactttaaagtagaacacctcagtcaagaaatc
aaccatttacaaaaattatttagggaagaaaatgacatcaatgacagtatccgtcatgaa
gtcaccagactgacatctgaaaacatgatgattccagactttaaacagcagatttcagaa
cttgagaagcagaaacaggatcttgaaatccgtctaactgaacagactgaaaaaatgaaa
ggaaaaatagaagaactgtctagtcagttacatcgtaatatggaagaggaaggaatacaa
aggagaaccatggaagttcaaaatgaaatacacatcaaagaaaaagaaaagttgattggt
accattagggaagtgcaagatgccaatgatcacttgaagaaaaaatttgaaacagaaagt
gaagtcaagagcagtttcaagcaggaagcatctcgtctcaatatggaaaacagggatctt
gaggaagagttagacatgaaggatagaatgattaaaaagctgcaagatcaaatcaagaca
ctaactaagacaattgagaaagccaatgaggtgcattcgtctttggaaaccaaagagtat
gttggaatggtggaatataaaaaggaagatgaagctaagctggtgcaaaacctcattctt
gatctgaagcctcggggtgtggtagtgaacatgattccgggtctgccagctcatatccta
ttcatgtgcgtacgttacgcagactcgctaaatgacgccagtatgctcaagtccttcatg
aacatcaccattaacggcatcaagcaggtcatcaaggaacattatgaagattttgagatg
ctgtccttttggctttctaatacatgccatttccttaactgcttgaaacagtacagtgga
gaagaggaatttatgaagtataacactccacaacaaaataagaattgtttgatgaatttt
gacctttcagagtatagacagattcttagtgatgtggccatacggatatatcatcaattt
atttttgtaatggagaataatcttcaaccaatgatagtaccaggaatgttggaatatgaa
agccttcagggaatttctggcttgaaaccaacaggattccgaaagcggtcctccagcatt
gatgacacagatgcttacaccatgacctctatcctgcagcagctcagctatttttatact
accatgtgtcagaatgggctggaccacgagcttctaaagcagactgtaaagcagcttttc
tttctgataggagctgtcaccttgaatagtctctttcttcgcaaggacatgtgctcttgt
aggaaaggaatgcagataaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcacagccaaagaaactctggagcccctttctcaggctgcctggttg
ctccaggtcaaaaagatcacagataccgatgctaaagaaatatatgatcgctgcacttct
ctctctgctgtgcagatcataaagatccttaattcatacacacctatagatgacttcgag
aaaagagtgactccatcctttgtccgcaaagtacaggctctactaaatagcagagaggat
acaggtcagctgatgctggacaccaaatatctctttcaagtcacatttccctttatccct
tctccacatgctctggaaatgatagagatccccagcagtttaaaactgggctttcttacc
aggttatga
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integrated database retrieval system
