Sarcophilus harrisii (Tasmanian devil): 100913903
Help
Entry
100913903 CDS
T02286
Symbol
FGD1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100913903 (FGD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_9
FYVE_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
100913903
NCBI-ProteinID:
XP_031800154
Ensembl:
ENSSHAG00000004671
LinkDB
All DBs
Position
X:complement(82809314..82824992)
Genome browser
AA seq
870 aa
AA seq
DB search
MQGSGGAAPPGSPGPPRPPRPGRFSCHIEGAQPRPGLLPGPRLLVKSLSLEPAPQGRSGD
IPGLKPSPSKRAPGPKPQVPPKPAHLLGSRLAPLLEPIPPPPSRPLPADPRLTRALQPRA
EAAGGGSAVSSLIERFEREPAILAPEAGGFVPSELTVGPDSREGSPCPLLSAPGEKVPNR
DSGIGSISSPSAGEETCFSNTTGGGGGGGGGGEGGAEAMPGPPGGPLPVAPLQPPQGPPE
ADSDLDEEEEEDEDEGREGLPRPRMERQDSSELTVQQKVFHIANELLQTEKAYVSRLHLL
DQVFCARLLEEARTRSSFPADVVHGIFSNICSIYCFHQQFLLPELEKRMEEWDRYPRIGD
ILQKLAPFLKMYGEYVKNFDRAVELVNTWTERSAPFKVIIHEVQKEEACGNLTLQHHMLE
PVQRIPRYELLLKDYLLKLPHGSPDSKDAEKSLELIATAAEHSNAAIRKMERMHKLLKVY
ELLGGEEDIVSPANELIKEGHILKLSAKNGTTQDRYLILFNDRLLYCVPKLRLLGQKFSV
RACIDVDGLELKESSNLNLPRTFLVSGKQRSLELQARTEEEKKDWIQAIHTTLMKHERTL
ETFRLFNSAHREEDETPPSSPNVDLGKRAPTPIREKEVTMCMCCQEPFNPITKRRHHCKA
CGHVVCGKCSEFRARLVYDNNRSNRVCLDCYTALRGAQGPSPIPGQNTPQRRRSILEKQA
SVAAENSLVCSFMHYMEKGAKGWHKAWFVVPESEPLVLYIYGAPQDVKAQRSLPLIGFEV
GAPEANEHKERRHVFKITQSHLAWYFSPETEELQRRWMDVLARAGRGDELQAGPSILESR
EEEEAAAASAIAAGPEPEAPLSTSKQGPQG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagtggcggggccgcccccccagggagcccagggcccccgcggcccccaagg
cccggccgattctcctgccacatcgagggggcccaacccaggcctgggctgctcccaggg
ccacggctattggtcaagagtctctccttggaacctgccccccagggaaggtctggagat
atccctggtctgaaaccctctccttccaagagggccccagggcccaagcctcaggtgccc
cccaaaccagcccacctcctggggtctcggctggcccccctgctggaacccatccctccg
cctccctcccgcccgctccctgcagaccccaggctgaccagggcgttgcagcctcgggct
gaggcagctgggggaggctcagctgtgtcctccctgattgagaggtttgagagagagccc
gccatcctggcacccgaggcaggggggtttgtgccctcagagctgacagtggggccagac
tccagagagggctccccgtgccccctcctgtccgctccgggggagaaagtgcccaaccga
gacagcggcatcggaagcatcagctcgccctccgccggcgaggagacctgcttttccaac
accaccgggggtggcggtggtggcggtggtggcggcgaagggggtgctgaggccatgccg
gggccccccgggggcccactccctgtggctcctctgcagcccccacagggccccccagag
gcagatagtgacctggatgaggaagaagaggaagatgaagatgaggggagagaggggctg
cccaggcccagaatggagaggcaggactcttcagagctcacggttcagcagaaggtgttt
cacattgccaacgaactcctgcagaccgaaaaggcttatgtgtcacgcttgcacctcctg
gaccaggtgttctgtgcccggctgttagaggaggcccgaacccgaagttccttcccagct
gacgtggtccatggcatcttctccaacatctgctccatctactgtttccaccagcagttt
ctgctgccggagctcgagaagcgcatggaagagtgggaccgatatcctcggatcggggac
atcctacagaagctggcaccattcttgaagatgtatggtgagtacgtcaagaacttcgac
agggccgtggagctggtgaacacgtggacggagcgctcggcccctttcaaggtcatcatc
catgaagtgcagaaagaggaggcctgtgggaacctcaccctgcagcaccacatgctggaa
cccgtgcagcgcattccccgctatgagctgttgctgaaagactacctgctcaagcttcct
cacggctccccagacagcaaggacgcagagaaatccttggaattgatcgctaccgcagct
gagcactctaatgccgccatacgcaagatggagagaatgcacaaactcctgaaggtctac
gagttgctgggaggggaggaggacatcgtaagtcccgcaaacgagctcatcaaggagggc
cacatcctcaagctgtctgccaagaatggaaccactcaggatcggtacctcatcctgttc
aacgaccgcttactatactgtgtccccaagcttcgactcctgggccagaagttcagtgtg
cgagcctgcattgatgtggatggcctcgagctgaaggaaagttctaacctgaacctgccc
cgaaccttcctggtgtccgggaaacagcgttctttggagctgcaggccaggactgaggaa
gagaagaaggactggattcaggccatccacaccaccctcatgaagcacgagcgcaccctg
gagaccttcagactgtttaactcagcccaccgagaggaggatgagaccccccccagctca
ccgaatgtggaccttgggaagcgggccccaacacccatccgagagaaggaggtgacaatg
tgcatgtgctgccaggagcccttcaacccaatcaccaaacggaggcaccactgtaaagcc
tgtggccacgtggtgtgcggcaagtgttcagagttcagggcccgattggtctacgacaac
aaccgctccaatcgcgtgtgcctggattgctatactgccttgcgtggggcccagggacct
agcccgatcccagggcagaacacaccccaacggaggcgctccatcctagagaaacaggca
tctgtggctgctgagaacagcctcgtctgcagcttcatgcactacatggagaaaggtgcc
aagggctggcataaggcctggtttgtggtccctgagagtgagccccttgtcctctacatc
tatggagcccctcaggatgtgaaggcccagcgcagcctgccccttattggctttgaggtg
ggggccccagaggccaatgagcacaaggagaggcgccacgtcttcaagatcacccaaagt
cacctggcctggtacttcagcccagagacagaggaacttcagaggcggtggatggatgtg
ttggcccgagctgggaggggggatgagctccaggcgggcccctccatcctcgagtcccgc
gaggaggaggaagcagcagcagcctctgcaatagcagcaggcccagagccggaagcccct
ctttccacatccaagcagggcccccagggctga
Sarcophilus harrisii (Tasmanian devil): 100927582
Help
Entry
100927582 CDS
T02286
Symbol
FGD3
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100927582 (FGD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
FYVE_2
IQ_SEC7_PH
UCH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
100927582
NCBI-ProteinID:
XP_003762237
Ensembl:
ENSSHAG00000017055
UniProt:
G3WXE9
LinkDB
All DBs
Position
1:91955178..92144250
Genome browser
AA seq
757 aa
AA seq
DB search
MESGLGSSASPNAADCELSFGSGDSSEKNKRDGSQPAMLGIVEPSSTDLGKIRELHIGDS
QSFENCSSAKPNKETMGRDGAKAPAIEQGSNGKIPNRDSGIDSPSCSVAGETFPTEEGGE
HKKYPTPGLLIEIVPEGEQNVSSPGDTQKEIAQEADSDVDEGSSEEPETTDVSRGEDLDV
AKCTDPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLAEAGIPSEVTTGIFSNISSIYC
FHGQFLLPELQTRITQEWSTNPRIGDILQKLAPFLKMYGEYVKNFDRAMDLVNTWTQRSS
PFKDVVQSIQKQEVCGNLTLQHHMLEPVQRIPRYEMLLKDYLKKLPGESPDRKDAEKSLE
LISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQD
RYLFLFNSMLLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKPNATHTFTITGKKRSLDL
QTRTEEDKKEWIEVILATIEKHKQKSETFRAFNSSFAQEEDVPDSPMASTSSVESMAGTD
GCGGFGGLDSKKSSKNRRDKEKQTCKSCSETFNSITKRRHHCKQCGAVICGKCSEFKADN
SRQSRVCKECFLMQSTVPNSPVSEAGSEQRKKLEKQNITAPENSLFCSHLQLMDKGKICC
KLWATIPKTEPLVLYLQGGQDGRAPRTIPLPGYEVTLPGPGEKLEAKYTLKLSQSHQTLF
LSFDDEELQRKWMEVLTRAARGETDDPSASVGNAQGP
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaggattgggctcctcagcatctccaaacgctgctgactgtgagctgagcttt
ggctctggagactcaagtgagaaaaacaaaagagatggaagccagccagctatgctgggc
attgtagagccatccagtacagacttgggcaaaataagagaactccacataggggatagc
caaagctttgagaactgttcttctgctaagcccaacaaagagaccatgggaagggatggt
gcaaaagccccggctattgagcagggcagcaatggaaaaatacctaaccgagatagtggc
attgacagcccttcttgtagtgtggcaggagagacctttccaactgaggaaggaggagag
cacaagaaatatcccaccccaggccttctaattgagatagtgcctgaaggagagcagaat
gtgagctcacctggtgacactcagaaagagatagcccaagaggctgacagtgatgttgat
gaaggcagcagtgaggagccagaaactacagatgtgtcaaggggagaagacctagatgta
gccaagtgtactgatccacagaagttattcaatattgcaaatgaactcctccatactgaa
gaagcctatgtcaaaagattgcacctactggaccaggttttttgcaccaagttggcagaa
gctggtattccatctgaagtgacaactggtatcttctccaacatttcttctatttattgt
ttccatggacagtttcttttaccagagctgcagactcgaattactcaagaatggagcaca
aatcccaggattggagatatccttcagaagctagctccattcctgaagatgtacggtgaa
tatgtaaagaactttgacagagctatggacttggtaaacacctggacccagagatcatct
ccatttaaagatgttgttcaaagcatccagaagcaggaggtctgtgggaacttaacatta
cagcatcacatgctagagccagtacagagaatccctcgctatgagatgttgctcaaggat
tatttgaagaagcttcctggggagtctccagacaggaaagatgcagagaaatccttggag
ctcatctccacagcagcgaatcactcaaatgcagctattcgaaagatggaaaagatgcac
aagctcttggaggtgtatgagcgtttaggaggagaagaagatatcgttaatcctgcaaat
gaacttattaaagaaggccatattcagaagctatctgcaaaaaatggcactgctcaagat
aggtacttgtttctgtttaatagtatgctgttatattgtgtgcccaaactgagactcata
ggtcagaaattcagcgttcgtgagaagatggacatagctggattgcaggtacaggaaatt
gccaagccaaatgcaacacatacttttacaataacaggaaaaaagaggtctttggacctg
caaacaaggacagaagaggacaagaaagaatggattgaggtaattcttgccacaattgaa
aagcacaagcaaaaaagtgagacattcagagctttcaatagttctttcgcccaggaggag
gatgtcccagactcacctatggccagcacaagctcagtggagtccatggcagggacagat
ggctgtggtggatttggaggacttgactccaaaaaatcttctaaaaatagaagagataaa
gagaagcaaacttgcaaaagctgcagtgaaacctttaattcaattacaaaaagacggcac
cactgcaaacagtgtggggctgtgatttgtgggaagtgctcagaatttaaagcagataat
agtcgtcagagtcgtgtttgcaaagagtgtttccttatgcagagtacagtcccaaatagt
cccgtctctgaggctggcagtgaacaaaggaagaagctggagaagcaaaatattactgca
cctgaaaacagccttttctgtagtcacctccagctcatggataaaggcaagatttgctgc
aagctatgggcaaccattccaaaaacagaacccttggtgctgtacctacaaggaggccag
gatggacgggccccccggacaatcccccttcctggctatgaagtgactttgcctggacct
ggcgagaagctagaagcaaaatatacactgaagctctcacagtcccaccagactctcttt
ctcagttttgacgatgaggaactgcagcggaagtggatggaagttctcaccagagctgcc
agaggagaaacggatgatcccagtgctagtgttgggaatgctcaagggccctga
DBGET
integrated database retrieval system
