| Entry |
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| Symbol |
UPF3B
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| Name |
(RefSeq) regulator of nonsense transcripts 3B
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| KO |
| K14328 | regulator of nonsense transcripts 3 |
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| Organism |
shr Sarcophilus harrisii (Tasmanian devil)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:shr00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100913987 (UPF3B)
03015 mRNA surveillance pathway
100913987 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:shr03019]
100913987 (UPF3B)
Messenger RNA biogenesis [BR:shr03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100913987 (UPF3B)
mRNA cycle factors
P-body specific factors
100913987 (UPF3B)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
X:complement(26143560..26161780)
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| AA seq |
570 aa
MKEDKEKARPKEKRPPSLAVSAAAATAAAAAETAAAAVTKAAVTAAAAAVTAASASASAP
APAPAPAPAPAPAPAPTPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPPPAPVPAPPAAS
FGGGAAADYAKTQDRKAERFKDKEMLSKVIIRRLPPTLTKEQLEEHLQPLPEHDYFEFFA
NDSSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYPAIVEFAPFQKSAKKKN
KKKDAKSGTIEDDPEYKKFLESYCAEEEKLTSTPETLLEEIEARNKELIAKKTTPLLNFL
KNKQRMREEKREERRRREIERKRQREEERRKWKEEERRKRKDTEKIKKIERGPEKERDRS
KDEPKIKLLKKPERGDEKELEKREKSKRLDKENLNEEKTNGQSSAAAKRSDGESKEEKAK
KSEDEGGKDHRERDKDYERDKERERQQREKEKLRRQEEDKRRQKERFEKEKTFRRKEEEM
KKERDLLRDKGKRSDGTDLIGNSDRMTKEDRKEDAAKRDRIRNKDRPAMQLYQPGARSRN
RLGPYEDSPLKSAEPAPDKKPENESRKEEE |
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| NT seq |
1713 nt +upstreamnt +downstreamnt
atgaaagaagataaggagaaagcgaggcccaaggagaagcggccgccctcgttagcagtc
tcggctgcagcagcgacagcggcggcagcagcagagacagcggcggcggcggtcaccaaa
gcagcggttaccgcagctgcggcggcggtaactgcagcctcagcctcagcctcagccccg
gccccggccccggccccggccccggccccagctccggctccagctccaaccccggccccg
gccccggccccggccccggccccggccccggctccggctccggctccggctccggctccg
gctccagccccggccccagccccacccccagctccagttccagctcccccagcagcgagc
ttcggcggcggcgcggcggcggactacgctaagacccaggacagaaaggccgagcgattc
aaagacaaggagatgctgagcaaggtgatcattcggaggttgcctcctactttgaccaag
gaacagcttgaagaacaccttcaacctctgcctgaacatgattattttgagttctttgca
aatgattctagtttgtatcctcacatgttttctagagcatacatcaactttaaaaaccaa
gaggacattgttttgttcagggatcgatttgatggttatgttttcgttgaccataaaggt
caggagtatcccgccatagtggaattcgctcctttccaaaaatcggcaaaaaagaagaac
aagaagaaagatgccaaaagtgggactattgaggatgaccctgagtacaagaaatttttg
gagagttattgtgcagaggaagagaaactgacgtctaccccggagactctgttagaagaa
atagaagcaagaaataaagagctgatagccaagaagacaactccccttttgaacttcttg
aaaaataaacagaggatgagagaagagaagagagaagagaggcgccggagagagattgag
agaaaaaggcaaagagaagaagaaaggagaaaatggaaggaagaagagagaagaaaaaga
aaggatactgagaaaatcaagaagattgagagaggtcccgaaaaagagagggatagatca
aaggatgaaccaaagattaagctgctcaagaagccagaaagaggagatgaaaaagaattg
gaaaaaagggaaaaatccaagagattggacaaagagaatctgaatgaggaaaaaaccaat
gggcagagtagtgcggcggccaagcgttctgatggggagtcgaaagaagagaaagccaag
aaatctgaagatgagggtggcaaagaccacagggagagggacaaggactatgaaagagac
aaggagcgagagaggcagcagcgagagaaggagaaactgaggcggcaggaagaagacaaa
aggagacaaaaggaacgctttgagaaggagaagacctttagaagaaaagaagaagaaatg
aaaaaggaaagagatctacttagggacaaaggaaagaggagtgatggtacagatttaata
ggcaactcagacagaatgaccaaagaggacagaaaagaagatgcagcgaaaagagatcgc
ataagaaacaaggaccgcccagcaatgcaactctaccagccaggtgcccggagccggaac
cgcctgggaccctatgaagacagccctttgaaatctgcagagccagctccagataaaaag
ccagagaatgagagtaggaaagaagaggaatga |
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