Sarcophilus harrisii (Tasmanian devil): 100914087
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Entry
100914087 CDS
T02286
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100914087
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100914087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
InlK_D3
Motif
Other DBs
NCBI-GeneID:
100914087
NCBI-ProteinID:
XP_003756688
UniProt:
G3W117
LinkDB
All DBs
Position
2:373958359..373963538
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AA seq
788 aa
AA seq
DB search
MELVGATNPRQRQVLFLLVLLGVSRAVSEPKRFSVVEEIERGSFVANVAKTLGLEVGELS
DRRSRIVFKGNKEYLQLNRRTGDLLLTEKLDREELCGPADPCVLPFKILLENPFQILPAE
LSVLDINDHSPVFLETEMLLKISESTSPGTVFQLESGKDLDVGSNSIQNYTISPNSLFHI
QIRDSSEGKRYPELVLDETLDREEQSEVTLTLTAVDGGVPPRSGTAQVRILVVDINDNAP
VFAQLRYEVQIPENSSIGSKIVTVSATDLDAGNYGEISYAFLHASENTRKLFHLKRELGE
LYLREKVDFESAQSYTINIQAVDGGGLSAECTVIIQVIDLNDNPPEVTISSFTSPIPENS
PETVVAVFSVSDLDSGENGKIVCSIQDDLPFVLKPSIENFYTLVTEGALDREYKAEYNIT
ITVMDLGSPRLKSEYNLTVLISDVNDNPPMFSERTYKVCLQENNSPALHIGSVSASDRDS
GINAKVTYSLLPPEPDDLPLFSYISINSDNGYLYALRSLDYEAIQAFQFTVRAADGGSPS
LSSQVLVQIVVQDENDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKVVAVDRDRGQNS
WLSYQLLKATDPGLFTLWAHNGEIRTVRSISDRDAMKQTLVVLVKDNGQPSLSTMATLNV
LLVDGFSEPYAKLPGASKEEVPTDSLTTYLIISLTTVSFLFLLSVIIFIVIHLWKKKKNS
TDIKHFTSNNHFPGHLVNISRTGTLSHSYQYEVCLASDSGASEFKFLKPIIPTLPTSDGN
KYSVENSA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgttggagcgacgaacccgcgacaaaggcaagttctctttctccttgttcta
ctgggtgtgtctagggcggtctcggagccgaaacggttttcagtagtggaggaaatagag
aggggctcctttgtggccaatgtagcaaagaccttgggtctggaagtgggggaactgtcg
gatcggaggagcagaatcgttttcaaagggaacaaagagtatttgcagctgaaccgtaga
accggggacctgctcttgacagagaaactggatcgggaggagctgtgcggccccgctgat
ccctgtgtgctcccttttaagatcttgttggaaaacccctttcagattcttccggctgaa
ttaagtgtactggacattaatgaccattcaccagtattcttagaaactgagatgcttcta
aaaatctccgagagcacctcccccgggactgtgtttcagctagaaagtgggaaagattta
gacgtgggtagcaacagtatccagaactacacaatcagtcccaactctctttttcatatt
caaattcgagatagcagtgaaggcaagagatacccagagcttgttctggatgaaacattg
gatcgggaagagcagtcagaggtcactttaactctcactgcagtggatgggggagtccca
ccaagatctggaactgcccaagtgcgaatcctcgtagttgatatcaatgacaacgccccg
gtgtttgctcaactgcgttatgaagttcaaatccctgaaaacagttccatcggatccaag
attgtcacagtttctgccacagatttagacgcagggaattatggagaaatatcttacgct
tttttgcatgcctctgaaaatactcgcaaacttttccaccttaaaagggaattgggagaa
ctttacttaagggagaaagtggattttgaatcagctcaatcttacactataaatatccaa
gccgtagacgggggtggtctttcagcagaatgtactgttattattcaggtcatagatctg
aacgataatcctccagaagtcactatatcttcatttaccagccccatcccagagaattct
cctgagacagtggtagctgttttcagtgtttcagatctggactctggggaaaatggaaag
attgtttgctccatccaagatgaccttccttttgtcctgaaaccttccattgagaacttc
tatacattggtaacagaaggagcattggacagagagtacaaggctgagtacaacatcact
attacagtgatggacttgggctccccgaggctcaaatctgagtataatctcacagtgctc
atctcggatgtcaatgataaccctcccatgttttctgagagaacctataaagtgtgtctt
caggagaacaacagtcctgccctccacattggcagtgtcagtgccagtgacagggactca
ggaatcaatgccaaagttacctactctctgctgcctccagagcctgacgacctgcccctc
ttctcctacatttccatcaactcagacaatggctatctctatgctctgagatctctggat
tatgaagccatccaagctttccagttcactgtgagggcagctgatggtggttctccatca
ctgagcagccaggttcttgttcagattgtggtacaggatgagaatgataactctcccttt
gttctgtaccccctgcaaaatggcacagctccctgcaatgatctggtgcccagaactgca
gagccaggttacctggtgaccaaggtggtagctgtggatagagaccggggacagaattcc
tggctttcctatcagctgctcaaggccacagacccaggcctcttcactttgtgggcccac
aatggggaaattcgcacagtaagatccatcagtgacagagatgccatgaagcagactctt
gtggtgctggtgaaggacaatggacaaccatctctgtctacaatggctacactaaatgtg
ctcttggtggatggcttctctgagccctatgcaaaactaccaggtgcatctaaggaggaa
gttcccactgactccctaacaacctacctaataatttccctgactactgtctcatttctg
ttcctgttatctgttataattttcattgtcattcacctttggaagaagaagaagaattcc
actgacattaagcacttcacttcaaataaccatttcccaggacacttagtgaatatcagc
aggacaggaaccctatcccatagttaccagtatgaggtatgtttggccagtgactcagga
gccagtgaatttaaattcctaaagcctattattcctacccttcctacttcagatggaaat
aagtactcagttgaaaactcagcctga
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