Sarcophilus harrisii (Tasmanian devil): 100914252
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Entry
100914252 CDS
T02286
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X5
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04015
Rap1 signaling pathway
shr04510
Focal adhesion
shr04722
Neurotrophin signaling pathway
shr04910
Insulin signaling pathway
shr05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100914252 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100914252 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100914252 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
100914252 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
100914252 (RAPGEF1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
100914252
NCBI-ProteinID:
XP_012409421
Ensembl:
ENSSHAG00000017744
LinkDB
All DBs
Position
2:complement(483269423..483452475)
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AA seq
1090 aa
AA seq
DB search
MGNVNEKQKAWKQSNLYLWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPADVPVK
TFEKPVNKEATDNFLPEGYPPPLDLDHQAVQFMSTSAVVPRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKEMVTTVKEVIKAVLDGVKELVRLTIEKQEHPSPTSPVKPS
SPACKTDSQPELPLTDREMEILNKTTSMSQSTELLHPDSMDEEVAPPKPPLPGIRVVDNS
PPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSY
GGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSTAD
QIPQQVACNLSPLPESVGESGSPFHGRPFQLPPSNSPQPELGNPLPMGHPTDTPPALPEK
KRRSAASQTTDSSSSSCRVSYERHPSQYDNIMEDDLQNPASLQPGSFTPFAAVLPFQQGG
SSANFVSDFAAPDSMGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIY
QQKNKLLMEVYGFNDSFTQELAPPPALPPKQRQLESPATKDGHPKDSSSHGGKENREGGE
RQLKSPDGLESTQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATET
DRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCPFPDTFKKRVSKNTFFVLVRVVD
ELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVNQKKMLKCANSDQPLAAR
GVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFN
NMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQ
KQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKV
NFSKRWQQFNILDSMRCFQQAHYEIRRNEDIVNFFNDFSDHLAEEALWELSLKIKPRNIT
RRKTDREEKT
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgttaatgaaaaacaaaaagcttggaagcagagcaatttatacctctggaaa
caagattcccagcgctctcatctctcctccttcaccatgaagctgatggacaaatttcac
tcgcccaaaatcaagagaacaccatcaaagaaaggaaaaccagccgatgtgcctgtgaaa
acttttgagaaacctgtgaacaaagaggccacagacaattttctaccagagggctaccct
cctcccttggatctggatcaccaagcagtacaatttatgtccaccagtgctgtggttccc
aggtctcagaggcagaagaatctcagctggctggaagagaaagaaaaagaggtggtcagt
gccttgcgctactttaagaccattgtggacaaaatggcaattgacaagaaggtactggaa
atgcttccaggttcggccagcaaggtcctggaggccatcctgcccctagtgcagacagac
cctcgcattcagcagagctcagccatctcctcttgctacagccgggtgtatcagagtcta
gccaatctcattcgttggtcagatcaagtgatgctggaaggtgtgaactcggaagataaa
gagatggtgacaactgtgaaagaagtcatcaaagctgttttggatggagtgaaggagctt
gtcaggctcacaatagagaagcaggagcatccatctcccacaagtccagttaagcccagc
tcaccagcctgcaaaactgacagccaacctgagctcccattgactgaccgggaaatggag
attctcaacaagacaactagtatgtcccaatcaacggagctgctgcatcctgactccatg
gatgaagaggttgctcctcccaagccccccctccctggcatccgagtggtggataatagt
cctccaccagctttaccacccaaaaagaggcagtcggcaccatctcccaccagagtggct
gtggttgcacccatgagccgggccaccagtggctcaagtttacctgttggaatcaataga
caggactttgatgtggactgttatgcccaaaggaggctgtctgggggcagccattcatat
ggcggggaatcccctcgcctctccccgtgcagcagcatcggcaagctgagcaagtccgac
gaacagctgtcctccttggaccgggacagtggccagtgctccaggaatacaagctgtgaa
acactagatcactatgaccctgattatgaatttctacagcaagacctctccactgctgac
cagatacctcagcaagtagcatgtaaccttagcccattgccagaatctgttggtgaatct
ggctctcctttccatggacgtcctttccagctgccacccagcaactccccacagccagag
cttggcaatcccttgcccatggggcatcctacggacacacctcctgccctgcctgagaag
aagcggaggagtgcagcctctcagaccacggacagctccagctccagctgtagagtctcc
tatgagaggcacccttcccaatatgacaatatcatggaggatgatctccagaacccggcc
tccctccagccaggatcattcacgccattcgctgctgtcctccccttccagcaaggaggc
tcttcagccaattttgtgtctgattttgctgctcccgattcaatgggtgaccccgagaaa
ccacctcctctacctgaaaagaagaacaaacacatgctggcctacatgcagctccttgag
gactactcagagccccagccttccatgttctaccagacgccccagaacgagcacatctac
cagcagaagaacaagctcctcatggaggtctacggctttaatgactccttcacccaggag
ctggccccgccccctgccctgccccccaagcagaggcagctggaatcaccagctacaaaa
gatggacatcccaaagattcctcttcacatggtgggaaagaaaacagagaaggtggtgaa
aggcagctgaagtcccccgatggtttggaatcgacccagtcagaggaggaagtggatgaa
ctctctctgattgaccacaatgaaattatggctaggttgacgttaaaacaagagggtgat
gatgggccagatgtccgtgggggatctggggatatattgctggtccatgcaactgagacc
gatagaaaagacttggttttgtactgtgaagcctttttgacaacctacaggacatttatc
acccctgaggaactcattaagaagctacagtatagatatgagaagttctgccccttccca
gacacattcaagaagcgagtcagcaagaatactttcttcgtgctggtgcgggtagtggat
gaactgtgcctggtggaattaactgaagagatcctaaagctcttgatggagctggtgttc
cggttagtgtgcagtggggagctgagccttgcccgggtcctccggaagaatatcttggac
aaagtgaaccaaaagaagatgctaaagtgtgccaactcggaccaacccctggctgctcga
ggggtggctgccaggcctgggactctgcatgacttccacagccatgagattgctgagcag
ctgacactgttggatgctgagctcttctacaagatagagatcccagaagttttgctttgg
gcaaaagagcagaatgaagagaagagccctaacttgacacagtttactgagcactttaat
aacatgtcctactgggttcgttcaataatcatgttgcaagaaaaagcccaggacagagaa
cggctgcttctgaaatttatcaagatcatgaagcacttgaggaagctaaataacttcaac
tcgtatctggctatcctttcagcactggactcagcacccatccggaggctggagtggcaa
aaacagacctcagagggcctggccgagtactgcactttgattgacagctcttcctccttc
cgggcctatcgggcggctctttctgaggtggaacctccatgcatcccatacctgggtctg
atcctgcaggacctcacctttgttcacctcggaaacccagactacattgacgggaaagtg
aatttttccaagcgctggcagcagttcaacatcctggacagtatgagatgtttccagcag
gcacattatgaaatccgcagaaatgaggacatcgtgaacttcttcaatgatttcagtgac
cacctagccgaggaggccttatgggaactctctctcaaaatcaaaccccggaacataact
cggcgaaaaacagatcgagaagagaagacctag
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