Sarcophilus harrisii (Tasmanian devil): 100914252
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Entry
100914252 CDS
T02286
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X5
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04015
Rap1 signaling pathway
shr04510
Focal adhesion
shr04722
Neurotrophin signaling pathway
shr04910
Insulin signaling pathway
shr05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100914252 (RAPGEF1)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
100914252 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
100914252 (RAPGEF1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
100914252
NCBI-ProteinID:
XP_012409421
Ensembl:
ENSSHAG00000017744
LinkDB
All DBs
Position
2:complement(483269423..483452475)
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AA seq
1090 aa
AA seq
DB search
MGNVNEKQKAWKQSNLYLWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPADVPVK
TFEKPVNKEATDNFLPEGYPPPLDLDHQAVQFMSTSAVVPRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQQSSAISSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKEMVTTVKEVIKAVLDGVKELVRLTIEKQEHPSPTSPVKPS
SPACKTDSQPELPLTDREMEILNKTTSMSQSTELLHPDSMDEEVAPPKPPLPGIRVVDNS
PPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSY
GGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSTAD
QIPQQVACNLSPLPESVGESGSPFHGRPFQLPPSNSPQPELGNPLPMGHPTDTPPALPEK
KRRSAASQTTDSSSSSCRVSYERHPSQYDNIMEDDLQNPASLQPGSFTPFAAVLPFQQGG
SSANFVSDFAAPDSMGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQNEHIY
QQKNKLLMEVYGFNDSFTQELAPPPALPPKQRQLESPATKDGHPKDSSSHGGKENREGGE
RQLKSPDGLESTQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRGGSGDILLVHATET
DRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFCPFPDTFKKRVSKNTFFVLVRVVD
ELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVNQKKMLKCANSDQPLAAR
GVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFN
NMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQ
KQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTFVHLGNPDYIDGKV
NFSKRWQQFNILDSMRCFQQAHYEIRRNEDIVNFFNDFSDHLAEEALWELSLKIKPRNIT
RRKTDREEKT
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgttaatgaaaaacaaaaagcttggaagcagagcaatttatacctctggaaa
caagattcccagcgctctcatctctcctccttcaccatgaagctgatggacaaatttcac
tcgcccaaaatcaagagaacaccatcaaagaaaggaaaaccagccgatgtgcctgtgaaa
acttttgagaaacctgtgaacaaagaggccacagacaattttctaccagagggctaccct
cctcccttggatctggatcaccaagcagtacaatttatgtccaccagtgctgtggttccc
aggtctcagaggcagaagaatctcagctggctggaagagaaagaaaaagaggtggtcagt
gccttgcgctactttaagaccattgtggacaaaatggcaattgacaagaaggtactggaa
atgcttccaggttcggccagcaaggtcctggaggccatcctgcccctagtgcagacagac
cctcgcattcagcagagctcagccatctcctcttgctacagccgggtgtatcagagtcta
gccaatctcattcgttggtcagatcaagtgatgctggaaggtgtgaactcggaagataaa
gagatggtgacaactgtgaaagaagtcatcaaagctgttttggatggagtgaaggagctt
gtcaggctcacaatagagaagcaggagcatccatctcccacaagtccagttaagcccagc
tcaccagcctgcaaaactgacagccaacctgagctcccattgactgaccgggaaatggag
attctcaacaagacaactagtatgtcccaatcaacggagctgctgcatcctgactccatg
gatgaagaggttgctcctcccaagccccccctccctggcatccgagtggtggataatagt
cctccaccagctttaccacccaaaaagaggcagtcggcaccatctcccaccagagtggct
gtggttgcacccatgagccgggccaccagtggctcaagtttacctgttggaatcaataga
caggactttgatgtggactgttatgcccaaaggaggctgtctgggggcagccattcatat
ggcggggaatcccctcgcctctccccgtgcagcagcatcggcaagctgagcaagtccgac
gaacagctgtcctccttggaccgggacagtggccagtgctccaggaatacaagctgtgaa
acactagatcactatgaccctgattatgaatttctacagcaagacctctccactgctgac
cagatacctcagcaagtagcatgtaaccttagcccattgccagaatctgttggtgaatct
ggctctcctttccatggacgtcctttccagctgccacccagcaactccccacagccagag
cttggcaatcccttgcccatggggcatcctacggacacacctcctgccctgcctgagaag
aagcggaggagtgcagcctctcagaccacggacagctccagctccagctgtagagtctcc
tatgagaggcacccttcccaatatgacaatatcatggaggatgatctccagaacccggcc
tccctccagccaggatcattcacgccattcgctgctgtcctccccttccagcaaggaggc
tcttcagccaattttgtgtctgattttgctgctcccgattcaatgggtgaccccgagaaa
ccacctcctctacctgaaaagaagaacaaacacatgctggcctacatgcagctccttgag
gactactcagagccccagccttccatgttctaccagacgccccagaacgagcacatctac
cagcagaagaacaagctcctcatggaggtctacggctttaatgactccttcacccaggag
ctggccccgccccctgccctgccccccaagcagaggcagctggaatcaccagctacaaaa
gatggacatcccaaagattcctcttcacatggtgggaaagaaaacagagaaggtggtgaa
aggcagctgaagtcccccgatggtttggaatcgacccagtcagaggaggaagtggatgaa
ctctctctgattgaccacaatgaaattatggctaggttgacgttaaaacaagagggtgat
gatgggccagatgtccgtgggggatctggggatatattgctggtccatgcaactgagacc
gatagaaaagacttggttttgtactgtgaagcctttttgacaacctacaggacatttatc
acccctgaggaactcattaagaagctacagtatagatatgagaagttctgccccttccca
gacacattcaagaagcgagtcagcaagaatactttcttcgtgctggtgcgggtagtggat
gaactgtgcctggtggaattaactgaagagatcctaaagctcttgatggagctggtgttc
cggttagtgtgcagtggggagctgagccttgcccgggtcctccggaagaatatcttggac
aaagtgaaccaaaagaagatgctaaagtgtgccaactcggaccaacccctggctgctcga
ggggtggctgccaggcctgggactctgcatgacttccacagccatgagattgctgagcag
ctgacactgttggatgctgagctcttctacaagatagagatcccagaagttttgctttgg
gcaaaagagcagaatgaagagaagagccctaacttgacacagtttactgagcactttaat
aacatgtcctactgggttcgttcaataatcatgttgcaagaaaaagcccaggacagagaa
cggctgcttctgaaatttatcaagatcatgaagcacttgaggaagctaaataacttcaac
tcgtatctggctatcctttcagcactggactcagcacccatccggaggctggagtggcaa
aaacagacctcagagggcctggccgagtactgcactttgattgacagctcttcctccttc
cgggcctatcgggcggctctttctgaggtggaacctccatgcatcccatacctgggtctg
atcctgcaggacctcacctttgttcacctcggaaacccagactacattgacgggaaagtg
aatttttccaagcgctggcagcagttcaacatcctggacagtatgagatgtttccagcag
gcacattatgaaatccgcagaaatgaggacatcgtgaacttcttcaatgatttcagtgac
cacctagccgaggaggccttatgggaactctctctcaaaatcaaaccccggaacataact
cggcgaaaaacagatcgagaagagaagacctag
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integrated database retrieval system
