Sarcophilus harrisii (Tasmanian devil): 100914263
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Entry
100914263 CDS
T02286
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100914263 (KATNB1)
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100914263 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
RMC1_N
Beta-prop_WDR19_1st
eIF2A
WDR54
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_NWD2_C
PROPPIN
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_VPS8
F-protein
Motif
Other DBs
NCBI-GeneID:
100914263
NCBI-ProteinID:
XP_031805781
UniProt:
A0A7N4P907
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All DBs
Position
2:36419391..36437189
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AA seq
657 aa
AA seq
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MATPVVTKTAWKLQEIVAHASNVSSLVLGKGSGRLLATGGDDCRVNLWSVNKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYKGHTQAVRCLRFSPDGKWLASAADDHSVKLWDLTAGK
MMSEFLGHTGPVNVVEFHPNEYLLASGSADRTIRFWDLEKFQVVSCIEGEPGPVRSILFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLTTCNNQLIGVSFAQSNVSSYVV
DLNRVTRSGTIVQDPVQDSRPVAQPTPTGSTIRRGYERPATACSKPQRVKQNSESERRSP
SSEDDRDERESRAEIQNAEDYKEIFQPKNSISRTPPKRSEPFPAPPEDEVAIAKEASKPS
QAMDVQLPMPNRGNSDFVPRVPVATSTPMPKAEPAVIPAARNEPIGLKASDFLPAVKMPN
QSEMVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVV
DLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILA
APPSVGVDISREERLHKCRLCYKQLKNISHLIKTKSGLSGRHGSAFRELHLLMAPLD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccggttgttaccaagaccgcatggaagctacaggaaattgtggcccacgcc
agcaacgtgtcctccctggtgttgggcaaaggttcgggacggcttttagcaacaggagga
gatgattgccgggttaacctgtggtcagtgaacaagcccaactgcatcatgagcttaact
ggccacacgtcgcctgtggagagcgtccgactcaacacccctgaggagctcattgtggcc
ggatcccagtcaggctccattcgcgtttgggacctggaagctgccaaaattcttcgcacc
ttaatggggcataaagccaacatctgcagcctggacttccatccctatggggagtttgta
gcctctggttctcaggatacaaacattaagctctgggacatacggagaaaaggctgtgtg
ttccggtataaggggcacactcaggccgtcagatgtctccggtttagccccgatgggaaa
tggttagcatctgctgcagatgaccacagcgtgaagctttgggatctgactgcggggaag
atgatgtccgagttcctgggacacacggggcccgtcaacgtggtagagtttcaccccaat
gagtacctcctggcttctggcagtgcagacaggacaatccgcttctgggatctggagaag
ttccaggtggtcagctgcattgaaggggaacctgggcctgtcaggagtatactcttcaac
cctgatggctgctgcttgtacagcgggtgtcaagactcccttcgggtgtatggctgggaa
ccggagcgctgcttcgatgtggtcctggtgaactggggcaaggtggccgacctgaccacc
tgcaacaaccagctgatcggcgtctcctttgcccagagcaacgtttcctcttatgtggtg
gatctgaaccgggtcacgaggtctgggactattgtgcaagacccagtgcaggacagcagg
cccgtggctcagcccacacccaccggttccaccatccgccgagggtacgagaggccggcc
acagcctgcagcaaaccccagagggtgaagcagaactcggagagcgagaggcggagcccc
agcagcgaggatgaccgtgacgagcgggaatcccgggccgagatccagaacgctgaggac
tacaaggagatcttccagcccaagaacagcatcagtcggaccccacccaagaggagtgag
ccattccccgcccctccagaggatgaagtggccatagcaaaggaggcgtccaagcccagc
caggccatggacgtccaactcccgatgccaaacagaggaaactctgactttgtgcccagg
gttcccgttgccacctccaccccaatgcccaaagctgagcctgctgtcattcctgctgcc
agaaatgagcccatcgggctcaaagcctccgacttcctacctgccgtgaagatgcccaac
cagtcagagatggtggatgaagatgccatgtcccagatccgaaagggccacgataccatg
tgtgtggttctgaccagccgtcataagaacctggacacagtgcgggccgtctggaccacg
ggcgacatcaagacatccgtggactcagccgtggccatcaacgacctgtccgtggttgta
gacctcctcaacatagtgaatcagaaagcgtctctttggaagctggacctctgcactact
gtcctcccccagatcgagaagctgcttcagagtaaatatgagagctacgtgcagacgggg
tgcacctccttaaagctgatcctgcagcggtttctacccctgatcacagacatcctggct
gccccgccttcagtgggggtggacatcagccgagaggagagactccacaagtgcaggcta
tgctacaagcagctgaagaacatcagccacctcatcaagaccaagtccggcctcagcggc
cgccacggcagtgccttccgggagctgcatctgctcatggcccccttggactga
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