Sarcophilus harrisii (Tasmanian devil): 100914278
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Entry
100914278 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha chain
KO
K07374
tubulin alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04145
Phagosome
shr04210
Apoptosis
shr04530
Tight junction
shr04540
Gap junction
shr04814
Motor proteins
shr05010
Alzheimer disease
shr05012
Parkinson disease
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100914278
09143 Cell growth and death
04210 Apoptosis
100914278
09144 Cellular community - eukaryotes
04530 Tight junction
100914278
04540 Gap junction
100914278
09142 Cell motility
04814 Motor proteins
100914278
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100914278
09164 Neurodegenerative disease
05010 Alzheimer disease
100914278
05012 Parkinson disease
100914278
05014 Amyotrophic lateral sclerosis
100914278
05016 Huntington disease
100914278
05020 Prion disease
100914278
05022 Pathways of neurodegeneration - multiple diseases
100914278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100914278
03036 Chromosome and associated proteins [BR:
shr03036
]
100914278
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100914278
04147 Exosome [BR:
shr04147
]
100914278
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100914278
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100914278
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100914278
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100914278
Exosomal proteins of other body fluids (saliva and urine)
100914278
Exosomal proteins of colorectal cancer cells
100914278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
DUF7281
Motif
Other DBs
NCBI-GeneID:
100914278
NCBI-ProteinID:
XP_031804921
LinkDB
All DBs
Position
1:712224360..712230083
Genome browser
AA seq
383 aa
AA seq
DB search
MVGGDSFKPSRAGRAGPGCFVGPEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH
YTIGKEIVDLVLDRIRKLADLDGLQGFPHLPSRGGTGPGPRLERLGLFGKSKLXFAIYPG
PRFQAGVEPTTPSHHPTTLNTRLAFXGRQRPYKCGADIGAPTNLNRLIGQCPSIRLLGPR
AGTDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDP
RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGD
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
LEKDYEEVGVDSVEAEAEEGEEY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtggggggcgattcctttaagccttcacgagccgggcgggcaggcccaggctgtttt
gtgggacctgagccaaccgtcgtggatgaagtccgtactggcacgtacaggcagcttttc
caccctgagcagctgataacgggaaaggaggatgcagccaacaactacgcccgaggccac
tataccattggcaaggagattgttgacctggtcctcgatcggatccgcaaactggctgat
ctggacgggctccagggcttccctcatcttcccagccgaggaggcacaggcccggggcct
cgtctggaaaggctcgggttatttgggaagtccaagctgnggtttgccatttaccccggg
cccaggttccaagcaggggtggagccgacaactccatctcaccaccccacgaccctgaac
acccgattggccttcnnaggtcgacaacggccatataaatgcggcgccgacatcggcgcc
cccaccaacctgaaccgtctgattgggcaatgcccctcgatccggctccttggcccgcgg
gcgggaaccgacctgacggaattccagaccaacctggtgccctacccgcgtatccacttc
cccctggctacctacgctccggtcatctcggccgagaaggcgtatcacgagcagctgtcc
gtggcggagatcaccaatgcctgcttcgagcccgccaaccagatggtcaagtgtgatccc
cgccacggcaagtacatggcctgctgtatgctgtaccgaggggacgtggtccccaaagat
gtcaacgccgctatcgccaccatcaagacgaagcgcacgattcagtttgtggattggtgc
cccacgggattcaaggtgggcatcaactaccagccccccaccgtggtgcccggtggcgac
ctggccaaggtgcagcgggccgtgtgcatgctgagcaacaccacggccatcgcggaggcc
tgggcgcggctggaccacaagttcgacctgatgtacgccaagcgggccttcgtccactgg
tacgtgggggagggcatggaggaaggcgagttctcggaggcccgggaggatctggccgct
ctggagaaagattacgaagaggtgggcgtcgactcggtggaggccgaggctgaggaaggg
gaagagtactag
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