Sarcophilus harrisii (Tasmanian devil): 100914313
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Entry
100914313 CDS
T02286
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015
mRNA surveillance pathway
shr05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100914313 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
100914313 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100914313 (HBS1L)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100914313 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
100914313
NCBI-ProteinID:
XP_003769520
Ensembl:
ENSSHAG00000013509
UniProt:
G3WKA1
LinkDB
All DBs
Position
4:160660950..160792603
Genome browser
AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRHDKPSSFVEPVEEYDY
EDTKEPTNSISNHQLSGIDQARLYSCLDHMREVLGDDVPDQTMIEAVLQSKFDVEKALAM
VLEQDKKQTKSEEAISMGKATKGKSVDHQSSRSESEIVPKVTKMTVSGKKQTMGFEIPGV
TAEENGDSVHTPHKGPPSEDASIVSSGILETVSKSTLPSHTIQALEEQNTTPTPVKKSNK
LKQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
ITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITKSQSSELTKWYKGQCLLEQIDSFKPP
QRSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGIMLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFKARILIFNIEIPITKGFPV
LLHYQTVSEPATIRRLISILHKSTGEVTKKKPKLLTKGQNALVELQTQRPIALELYKDFK
ELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcacaggaacgtccgaggctacaactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcaagacatgacaaaccatcatcatttgttgagccagtagaagaatatgactat
gaagatacaaaagaacctactaactctatttctaatcatcagcttagtggaattgatcaa
gctcgtctttactcatgccttgatcacatgagagaggtgcttggagatgatgtcccagat
caaacaatgattgaagcagtgttgcaaagtaaatttgatgtggaaaaggctttagctatg
gtgcttgagcaagataaaaagcagaccaagagtgaggaagctatctccatgggaaaggca
acaaaaggaaaatcagtagatcatcaatcatctcgaagtgaatctgaaattgtgccaaaa
gttacgaaaatgactgtatctggaaagaagcagactatgggatttgaaattcctggagtg
actgctgaagaaaatggagatagtgttcacacacctcataaaggacctcctagtgaagat
gccagcattgtttcttctggtattcttgagacagtttctaaatcaactcttccatcccac
accattcaggcattagaagaacagaacacaacaccaacaccagtgaaaaaatctaacaag
ctgaagcaacaaatagatgtgaaggctgaactggaaaagaggcaagggggaaagcaactg
ctcaacttggtggtaattggtcatgtggatgccggaaaaagtactctgatgggtcatctg
ctttaccttctgggcaatgtaaataaaagaactatgcacaaatatgaacaagaatctaaa
aaggctggtaaagcctcatttgcttatgcttgggtcttggatgaaacaggagaagaaaga
gaaaggggagttacaatggatgtgggtatgacaaagtttgagacaaaaaccaaagttatt
acattaatggatgctccaggacataaagacttcattccaaatatgattactggagctgcc
caggctgatgttgctgttttagtggtagatgccagtaggggggaatttgaagctgggttt
gagactggaggacagacacgagaacatggactcttggttcgctctcttggagtaacacag
ctggcagttgcagttaataaaatggatcaggttaattggcagcaggaaagatttcaagag
attactggcaaacttggacacttcctgaagcaggctggttttaaggagagtgatgtggcc
tttatccccacaagtggtcttagtggagaaaatctaattacaaaatctcaatcaagtgaa
ctaacaaaatggtataaaggacaatgtttgttagaacaaattgattctttcaagcctcca
caaagatctattgaaaagccttttagattatgtgtatctgatgtttttaaagatcaagga
tctggattttgtgtgactggaaaaattgaagctggttatatccagactggtgaccgactt
ctagcaatgcctcctaatgaaacttgcactgcaaaaggaatcatgctacatgatgaaccc
gttgattgggcagcagcaggagatcatgttagtctcaccttggttggtatggatatcatc
aaaatcaatgttggttgtattttctgtggtcccaaagaacccattaaagcctgtactcgt
ttcaaagctcgaatcctcatctttaatattgaaattcccatcactaaaggattccctgta
ctgttacactatcaaactgtaagtgaacctgctaccatcagaagattgattagcatcctg
cacaaaagcactggtgaagtcacaaagaaaaaacccaagttgttgactaaaggccagaat
gctttagtagaactgcagacacaaagacctattgctcttgaattatataaggactttaaa
gaactgggaagattcatgttgcgttacagtggttctactatagctgcgggtgttgtcact
gagattaaagaatga
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