Sarcophilus harrisii (Tasmanian devil): 100914342
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Entry
100914342 CDS
T02286
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100914342
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100914342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
MAP17
He_PIG
Motif
Other DBs
NCBI-GeneID:
100914342
NCBI-ProteinID:
XP_031809283
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All DBs
Position
2:374017137..374024533
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AA seq
792 aa
AA seq
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MRCAPTQTMETALGKTQRNRQVMFFIVAFLLSGAGSDPGRFFVAEEMESGSFVANVVKTL
GMGVEELSARGARILSEDKKQLLQLNSETGDLLIKEKLDREELCGLTEPCVVPFQILMEK
PLQFFRAELQVEDINDHSPTFLDMKTFLKISESTPLGTTFPLTIAQDMDVGKNGLQNYTI
SPNGYLFLRTVTYSDGRKYPELVLEKALDREKQPELTLTITAMDGGSPVKSGTAQVQITV
VDINDNTPVFAKPQYEVQIPENSPVGSLIVTVSAEDLDAGIYGDITYTLFQPTAKVSQTF
GVDPVSGDIRLKREVDFEEIQTYDLHIEAIDGGGLSTKCNVLVHVTDLNDNPPELTMSSF
TSNIPENSSETVVAVFSIRDRDSRDNGRMTCSIQEDLPFVLRKQFENIYILITEETLDRE
NKAQYNITITVKDFGSPRLKTEHNITVIISDINDNPPVFNQTSYTLYLQENNSPALYIGS
VSASDRDTGANAKITYSLLPLEDQNLPLFSYISIDSENGYLYALRSLDYEVIQTFQFTVR
ATDGGSPALNSKALIRVVVQDENDNSPFVLYPLQNGTAPCNDLVPRGAEPGYLVTKVVAV
DRDSGQNSWLSYQLFKATDPSLFTVWAHNGEVHTARPFSDRDAIKQKLLVLVKDNGQPPL
STAVTLNVILVDGFSEPYIHLSDAPKEQAQSDSLTIYLVISLASVSFLFLVSIILFISVH
LWKKKRNTLNNEYFGSHGPSSSHLVDVNGTGTLSQKYQYEVCLDSGLGSNEFKFLKPIIQ
VQGYGKEENLSF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtgcacccacccaaacaatggaaactgcgctagggaaaactcagcggaacagg
caagtgatgttctttattgtagcttttctcttgtctggggcgggttccgatccggggagg
ttttttgtggcagaggaaatggaaagcggctcctttgtggccaatgtagtaaagaccctt
gggatgggagtggaagaattgtcagcccggggagcccgaatcctttcggaggataaaaaa
cagcttttacagctcaatagtgagaccggagacctccttataaaagagaaactggaccgg
gaagaactatgcggcctcaccgagccctgtgtggtacctttccagatcttaatggaaaaa
cctttgcagttctttcgggctgagctccaggtcgaagatataaatgaccattcgcccaca
ttcttagatatgaagacatttttgaaaatatcagaaagtactccattggggacaacgttt
cccctgactatcgctcaggatatggatgtcggaaaaaatggtctccaaaactatacaata
agcccaaacggctacctctttcttcgcactgtcacttatagtgatgggaggaagtatcca
gagctggttttggaaaaagctctggatcgtgagaagcagccggaactcacattaaccatc
acggccatggatggtgggtccccagtgaagtctggcaccgcccaagtgcagatcacagtt
gtggacatcaatgacaacacacctgtgtttgctaagcctcagtacgaagttcagatccct
gagaacagcccagttggttctctgattgtgactgtctctgctgaagatttagacgctggt
atctatggagatataacttacaccttattccaaccaactgcaaaagtcagtcaaacgttt
ggagtagaccctgtctcaggagacatacgactaaaaagagaagtagatttcgaggaaatt
caaacgtatgatctacatattgaagcgatagatggcggcggtctttctacaaagtgcaat
gtcttggtccatgtgacagatctaaatgacaaccctccagaattgacaatgtcgtcattt
accagcaacattccagagaattcctctgagactgtggttgctgttttcagcatccgagat
cgtgactcaagggacaacggaaggatgacttgttccatccaggaagatctccctttcgtc
ttgagaaaacaatttgaaaatatctacatcctcataacagaagagacactggatagagag
aataaggcacaatataatatcaccattactgttaaggattttgggtccccaagactcaaa
actgagcacaatatcacggtgatcatctctgacatcaatgacaacccaccagtttttaat
cagacaagctatacactctacctccaagagaacaatagccctgctctttatattggtagt
gtcagtgccagtgacagggacacaggggctaatgccaaaatcacctattcactgctgcct
ctagaggatcaaaacctgccccttttttcctacatctccatcgactcagaaaacggctat
ctttatgccctgagatctctggattatgaagtcatacaaactttccagttcactgtaagg
gcaactgatggaggctccccagccctgaacagcaaggctctcattcgtgttgtggtccaa
gatgagaatgacaactctccctttgtgctgtacccactgcaaaatggtacagccccctgt
aatgacctggtacccagaggtgcagagccaggttacctggtgaccaaggtagtggctgtg
gatagggactcagggcagaattcttggctttcctatcaactgtttaaagctacagaccct
agtcttttcactgtctgggcccataatggagaagtgcatacagcaagacctttcagtgac
agagatgccatcaagcaaaagctcttagtactggtgaaggacaatggacaaccacctcta
tccacagcagtcacactgaatgttatcctggttgatggcttctctgaaccctacattcat
ctctcagatgcacccaaggaacaggcccagagtgactctctcactatttacttagtcatt
tctctggcctctgtttcttttctcttcctagtttccataatcctgttcatctcagtacac
ctttggaagaaaaaaagaaataccttaaacaatgaatactttggatcccatgggccttca
tcgagtcacttggtggatgttaatggaactgggaccctgtcccagaaatatcaatatgag
gtatgcctggacagtggcttagggagcaatgaattcaaattcctaaagcccattatacaa
gttcaagggtatggaaaagaggaaaatctgtcattttag
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