Sarcophilus harrisii (Tasmanian devil): 100914423
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Entry
100914423 CDS
T02286
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100914423 (RC3H2)
04121 Ubiquitin system [BR:
shr04121
]
100914423 (RC3H2)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100914423 (RC3H2)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100914423 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
100914423
NCBI-ProteinID:
XP_003757154
Ensembl:
ENSSHAG00000007498
LinkDB
All DBs
Position
2:complement(446408700..446469082)
Genome browser
AA seq
1194 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKITATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKLVPSTNGISSAENSVSQLIPRGADTTLRALENVKKVGKVGSSGQNISGASAE
SVTENKIGSPPKTPVSNVAATSAGPPTVGTELNSVPPKSSSFVTRVPVYPQPSESIQYFP
DPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYSNSLDGYYPMACQPPSEPRTSVPLPREPCGHLKTSYEDQLRRKP
EQWAQYHTQKAPLVSSTLPMATQSPTPPSPLFSVDFRTEFSENVSDVRGTKFEEDHLSHY
SPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRVKEEDPIIPF
SDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGS
DSTTSTHYIERDRFIVTDLSSHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWN
SLDEASHLTLNLLSKEMELRNGESDYTEDTADTKPDRDIELELSALDTDEPDGQSEQIEE
ILDIQLGITSQSDQLMNGTTIENGHSLKQHPKEPVEPKRQSLGEDHVILEEQKAVLPVTS
CFSQPIPASISNASCLPVTTSVSVSNLILKTAHIMSEDKNDFLKPVANGKMVNS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaagctgctcagtggacagaattcctgtcctgtccaatctgttataatgaa
tttgatgagaatgtgcacaagcccatcagtttaggttgttcacacaccgtttgcaagacc
tgcttaaataaacttcaccgaaaagcatgcccttttgaccagactgccatcaacacagat
attgatgtgcttcctgtaaactttgcacttctccaattagttggagcccaggtaccagat
catcaaacagtaaaattaagtaatctaggagagaataagcactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggagggaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgactcttgtaaattgt
cagcttgtggaagaagaaggtcgtgtaagagctatgcgagcagcacgatcacttggggaa
agaactgtaactgaattgattttacaacaccagaaccctcagcaattatctgccaatcta
tgggctgctgtcagggctcggggatgccaattcttaggaccagctatgcaagaagaggcc
ttaaagttggtattactggccctggaagatggttctgctctttcaaggaaagttttggta
ctttttgttgtccaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggc
catgttgtgcagctactgtatcgtgcttcttgttttaaggtcaccaaaagggatgaagat
tcttctctgatgcagctaaaggaagaatttagaagttatgaggctttgagaagggagcat
gatgcccagatagttcatattgctatggaagcagggcttcgtatatcaccagaacagtgg
tcttcacttctctatggtgatttggcacataaatcacatatgcagtccatcattgataag
cttcagtctccagaatcctttgcaaagagtgtccaggagttgacaattgttttgcagcgt
acaggtgatccagcaaacctaaatcgattgagacctcatttggaacttcttgcaaacata
gatcctaatccagatgctgtctcaccaacttgggagcaattagaaaatgcaatggttgct
gtaaagactgtggtgcatggacttgtggactttattcagaactatagtcgtaaaggccat
gaaacaccacagccgcagccaaatagcaaatataaaactagtatgtgccgagatctgcga
cagcagggggggtgtccacgaggaacaaattgtacatttgctcattctcaggaagagctt
gaaaagtatcgtttaaggaacaaaaagatcacagcaactgtacgaacatttcctctccta
aataaagttggcgtaaacaatactgtcacaactacagctggaaatgtcatttctgtcata
ggaagtactgaaacaactgggaaacttgttccaagtaccaatgggatttcaagtgcagaa
aatagtgtttcccagctaatcccccgtggtgctgacaccacattaagagctttggagaat
gtgaagaaagtagggaaggttggctccagtggtcagaatatctctggggcttctgcagaa
tctgtaactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcagct
acctcagctgggccccctactgttggaacagagctgaattcagtgcctccaaaatccagc
tcatttgtaactagagtacctgtatatcctcagccttctgaaagcatccagtattttcca
gatccaaggacccagatatcctttgaagttccacagtacccacagacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgttttgtgaggtccaat
aatgttccagaatcttccctcccacctgcttctgtgccatatgctgatcattacagtaca
tttccccctcgagatcgagtgaattcctctccttaccagcctcctcctccgcagccgtat
ggaccagttcccccagtaccttctggaatgtatgctcctgtatatgacagtcggcgcatc
tggcgtccaccaatgtaccaacgagatgacattattaggagcaattctttacctccaatg
gatgtgatgcattcatctgtctatcaaacatctttgcgagaaagatatagtaattcttta
gatggatattatccaatggcatgtcagccacccagtgaaccaagaacaagtgtaccttta
ccgagggaaccttgtggtcatttgaagactagttatgaggatcagttaagacgaaaacca
gaacagtgggcgcagtatcatacccagaaagcaccccttgtttcttcaacacttcctatg
gcaacacagtcaccgacaccaccttctcctctgttcagtgtagactttcgtactgagttc
tccgagaacgtaagtgatgtacgtggtacaaaatttgaggaagatcatctttcccattat
tcaccttggtcctgtggcaccataggctcttgtataaatgccattgattcagagcccaag
gatgtaattgctaattcaaatgctgtattaatggatttggacagtggagatgttaaaagg
agagtacatttatttgaaactcaaagaagggttaaagaagaagatcctataattcctttt
agtgatggacccattatctccaaatggggtgcaatttccagatcttcccgaacaggttat
cataccacagatcctatacaggccactgcttcccaaggaagtgctactaaacctatcagt
gtatcagattatgtcccttatgtcaatgctgttgattcaaggtggagttcatatggctct
gattctactacttcaacacactatatagaacgggatagatttattgttactgatttatcc
agtcatagaaagcattccagtactggagatcttctaagcattgaacttcagcaggcaaag
agcaactcattgttgcttcagagggaggccaatgccctagccatgcaacagaaatggaat
tccttagatgaagccagtcaccttaccttaaatctcctaagcaaagaaatggaattgaga
aatggagagagtgattatacagaagatacagcagatactaagcctgatagagatattgaa
ttagaactttcagcacttgacactgatgaacctgatggacaaagtgaacaaatagaagaa
attctggacatacaacttggtatcacttctcaaagtgatcagctgatgaatggaactaca
atagaaaatggccactcgctaaaacaacacccaaaggaacctgtggagcccaagagacaa
agtttaggtgaagaccatgtgattctggaggaacaaaaagcagtcctgccggtaacttct
tgcttcagccagccaatcccagcatctattagcaatgcaagttgcctgcccgtcactaca
tctgtcagtgtcagcaatctcatcttgaaaacggctcatattatgtctgaagataaaaat
gactttttaaagcctgttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
