Sarcophilus harrisii (Tasmanian devil): 100914531
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Entry
100914531 CDS
T02286
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100914531 (DDX39A)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100914531 (DDX39A)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100914531 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100914531
NCBI-ProteinID:
XP_003760703
Ensembl:
ENSSHAG00000005494
UniProt:
G3VKE6
LinkDB
All DBs
Position
1:complement(650353301..650363910)
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AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQPMTESTPTPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVR
NKSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagacgtagaaaatgaactgcttgattatgaagaggatgaggagccccag
cccatgacagagagcacgcccacccctgctaagaaagacgtgaagggctcctatgtctcc
attcatagctcaggctttagggatttccttctgaagccagagctcctgagggctattgtg
gactgtggctttgagcatccatctgaagtccagcatgaatgtattccccaagccatattg
ggaatggatgtcctgtgccaagccaagtctggaatgggcaagactgcagtctttgtgttg
gctaccctgcagcagatcgagcctgtggatggacaggtaaccgttcttgtcatgtgccac
actcgggagttggccttccagatcagtaaggagtatgagcgcttctccaaatatatgccc
agtgtcaaggtctctgtgttctttggtggcctctcgatcaagaaggatgaagatgttctg
aagaagaactgccctcatgtagttgtggggacgcccggccggattctggccttagtacgc
aacaagagtctcaatctgaaaaatgtgaagcactttgtactcgatgagtgtgacaagatg
ctggaacagcttgacatgcgccgggacgttcaggagatcttccgcttgacaccccacgag
aagcagtgcatgatgttcagtgccacgctgagtaaggagataagacccgtctgcagaaag
ttcatgcaggatccaatggaagtttttgtggacgatgagacaaaattgacactgcacgga
ctacagcagtactatgtgaagcttaaggacagcgagaaaaacagaaaactctttgatctc
ttggatgtgctggagtttaaccaggtggtgatctttgtgaagtcagtgcagcgctgtgta
gcgttggcgcagctcctagtagaacagaacttcccagccattgccatccatagaggaatg
gctcaggaggagagattatcacgatatcaacagttcaaggattttcagcggcggatcctg
gtggccaccaatctctttggccgaggcatggatattgagcgggtcaatatagtcttcaat
tatgacatgcccgaggactccgatacctacctgcaccgggtggccagggctggccggttc
ggtaccaagggcttggccatcactttcgtctctgacgagggggatgctaagatccttaat
gatgtccaggaccggtttgaagtgaatgtggcagagctgcccgaggaaatcgacatctcc
acatacattgaacaaagtcgataa
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