Sarcophilus harrisii (Tasmanian devil): 100914572
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Entry
100914572 CDS
T02286
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100914572 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100914572 (NFASC)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
L1 family
100914572 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
100914572
NCBI-ProteinID:
XP_003767682
Ensembl:
ENSSHAG00000011503
LinkDB
All DBs
Position
4:98690375..98931146
Genome browser
AA seq
1489 aa
AA seq
DB search
MRLAARGAAGVEGDKRWPRQPRTLTAPGPELEPEREALDVERVSSSSQKAGTQKRESRKR
RTNPPKRLLDLCAVWESGVFHPSAGQDSASSTVSKRRVNETEKLSSLQAVQLEQQQETAR
SRGKGGWDRGPAPRMAVWTLLWIHATFSLWLFSFVGAIEVPLDPNIQNELSQPPTITKQS
VKNYIVDPRDNILIECEAKGNPAPSFQWTRNSRFFNVAKDPRVSMFRRSGTLVIDFRSGG
RPEEYEGEYQCFARNKFGTAVSNRIFLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPG
LPSPVIFWMSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKTDYSCNARFHFTHTIQQKN
PFTLKVLTTRGVSERTPSFMYPLGTSSSQMVLRGMDLLLECIASGVPAPDIAWYKKGGDL
PAGKVKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLI
LAPGEDGRLVCRANGNPKPTVQWLVNGDPLEVAPPNPSREVAGDTIIFRDTQIGSSAVYQ
CNASNDHGYLLANAFVSVLDVPPRMLSPRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFKN
GQGSNLDGGNYQVHENGSLEMTMARKEDQGIYTCVATNILGKAENQVRLEVKDPTRIIRV
PEDQVVKRGSNVVLECRVKHDPTLKLTVNWLKDDEPLYIGNRMKKEEDTLTIFGVADRDQ
GSYTCMASTELDRDIAKAYLTVLAAQVAPTNRMAPLPKERPDPPRDLELTDLEERSVRLT
WIPGDDNNSPITEYIVQFEEDQFQPGVWHSHSKHPGSVNSAVLQLSPYVNYQFRVIAVND
VGSSHPSIPSERYRTSGAPPESNPGDVKGAGSRKNNMEITWTPMNATSAFGPNLRYIVKW
RRREGRESWNNATVWGSRYMVSPTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRA
APTDVKVRVLNSTAIGLQWNRVYLDTVQGQLREYRAYFWRESSLLKGLWVSQKRQFASFS
SDRARGVVSSLFPYSNYKLEMVVVNGRGDGPRSEVKEFTTPEGVPSAPRRFRVRQPNLET
INLEWDHPEHPNGILTGYNLKYLAFNGTKTGKAVIETFSPNQTKFSIQRADPVSRYRFSL
SARTQVGPGEVVTEESPAPPNEATPTPAPTMLPPTTVSATSAASSTDVTAIATTAAATAV
PTVAPTTTTTTAATSTTTTTTSTTTTVATTASTTTTAATTTTESPPSAVTKIQDTAPYGQ
SIWNFTVKANSKSANLTWDHNLEPGTDFVIEYSDSKESTKIPSVKAQSISVTNLNPGIFY
SFRVYSQNRPAITSSLVTVQTATDSAFTKNQVDIATQGWFIGLMCAIALLVLILLIVCFI
KRSRGGKYPVREKKDVPLDPEDQKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSL
VDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggcggcgagaggcgctgcaggcgtagaaggggacaagcggtggccccggcaa
ccgaggaccctgaccgctcctggacctgaactggagccggagcgtgaagccctggacgtg
gagagagtgagcagtagcagtcagaaggcaggaacccagaagagagaatctagaaagagg
cgaacaaacccaccaaagaggttacttgacttatgtgcagtttgggaaagtggagttttc
catccctctgctggccaggacagtgcctccagtactgtttcaaaaaggagggtgaatgaa
acagagaagctgagctctctccaggcagtccagctcgagcagcagcaagagacggcgagg
tccagaggaaaggggggctgggatcggggcccagcacccagaatggctgtgtggacactt
ctctggatccatgcaaccttcagcctctggctcttcagcttcgttggggccattgaggtg
cctctggatccaaacattcaaaatgagctatctcagcccccaaccatcaccaagcagtca
gtgaaaaattacatcgtggaccctcgggataacatcctcattgagtgtgaagcaaaagga
aaccctgcccccagtttccaatggacacgaaatagccggttcttcaacgtggccaaggac
ccccgggtgtcaatgtttcgccggtcagggacactggtgattgacttccggagtggtgga
cgacccgaagagtatgagggagaataccagtgctttgcacgcaacaagtttgggacggct
gtatctaacaggatttttcttcaggtgtcaaaatcacccttgtggcccaaggaaaatctg
gatcctgtagtggttcaagagggagcccccctgaccctccagtgcaacccccctcctggg
ttaccatctcctgtcatcttctggatgagcagctcgatggagcctattaatcaggacaag
cgtgtctcccaaggccagaatggggatctgtacttctctaatgtgatgcttcaggacgcc
aagactgactacagctgcaatgcccgcttccactttacgcacaccatccagcagaaaaat
ccattcacgctcaaggtccttaccacccgaggagtctcagagaggacgcccagcttcatg
tatcccctgggcacgtcgagcagccagatggttctgaggggcatggacttgctgctggag
tgcatcgcctcaggagtaccagcaccagacatcgcatggtacaagaaaggtggggacctc
ccagctggcaaggtcaaatttgaaaactttaataaggccctgcgtatcaccaatgtctca
gaggaggactctggggagtatttctgtttggcctccaacaagatgggcagcatccggcac
acgatctcggtgagagtaaaggccgccccttattggctagatgaacccaagaaccttatc
ctggccccaggtgaagatggaaggctggtgtgtcgggccaatgggaatcccaagcccact
gtccagtggctggtgaatggggatcctttggaagtggcacctcccaacccaagtcgtgag
gtcgctggagacaccatcatatttcgggacactcagattggcagcagcgcagtgtaccaa
tgtaatgcatccaacgatcacggttaccttctagccaatgccttcgtcagcgttctggat
gtacctcctcggatgttatcccctcggaaccagctcatcaaagtgatccattataaccgg
actcggctggactgtcctttctttggctccccaatccccaccctccgatggtttaagaat
gggcaggggagcaacctggatggtggcaactaccaagtccatgagaacggcagcttggag
atgaccatggcccgaaaagaagaccagggcatctatacttgtgtggccaccaatatcctg
ggcaaagcagagaatcaagtccgcctggaggttaaagaccccacccggataattcgggtg
cctgaggaccaggtggtcaagagaggttcaaacgtcgtgttggagtgtcgagtgaagcat
gaccccactctgaagcttacagtcaactggctgaaggatgatgagccgctctacattgga
aacaggatgaagaaggaagaggacacccttaccatctttggtgtggctgaccgggaccaa
ggaagctacacctgtatggccagcaccgagcttgaccgagacatagccaaggcctatctc
actgtgctagctgctcaggttgctccaactaaccgtatggctcccctgcccaaagagcga
ccagatcctcctcgagacctagagcttactgaccttgaggaaagaagtgtgagactgacc
tggatcccaggggatgacaacaacagccccatcacagagtacatcgtacagtttgaagag
gaccagttccagcctggtgtctggcacagccattcaaaacacccaggcagcgtcaattca
gcggtcctccagctgtccccgtatgtcaactatcagttccgagtcatcgctgtcaatgat
gttggaagcagtcatcctagcatcccatcggagagatacaggaccagtggtgcaccccca
gaatccaatccgggtgatgtaaagggagctgggtctagaaagaacaacatggaaatcaca
tggacgcccatgaatgccacatctgcatttggacccaacctccgctatattgttaaatgg
cggcggcgagaaggaagggagagctggaacaatgccacggtatggggctcccgttacatg
gtgtcgccgacccctgtctacgtgccttatgagatccgagtgcaggcggagaatgatttt
ggaaagggacccgagccagacaccgtcattggctactctggggaagattatcccagggcc
gcacccactgacgtaaaagttcgagtcctgaacagcacagccatcggccttcagtggaac
cgagtctacctggacacagtccagggtcagcttagagagtatcgagcttatttctggagg
gagagcagcttgctgaagggcctctgggtgtctcaaaagagacaatttgccagtttctcc
agtgaccgagcccggggtgtagtgtcaagcctgttcccctacagcaactacaaactggag
atggttgtggtcaatgggagaggcgatgggcctcgcagtgaagtcaaggagttcaccacc
ccagaaggagtacccagtgcccccagacgtttccgagtccggcagcccaacctggagaca
atcaacctggaatgggatcaccctgaacaccccaatgggatcctgacaggatacaatctt
aaataccttgcctttaatggaaccaagacagggaaggctgtgattgagaccttctctccc
aatcagactaagttctcaatacagagagcagaccctgtgtcccgataccgcttttcactc
agtgccaggacccaagtgggtcccggggaagtggtcacggaggagtctccagctccacca
aatgaagctactccaaccccagctcccaccatgttgcctccaactacagtcagtgcaacg
agtgcggcgagcagtactgatgttactgccatagccaccaccgccgcggccacggcagtc
cccactgtggcacctaccactactaccaccactgctgccacctccaccaccaccaccacc
acctccaccaccaccaccgtcgctacaactgcttctactaccactaccgctgccaccact
accacggagagccctccatccgccgtgactaagatacaggacactgccccctatggacag
tccatatggaacttcacggtgaaggccaacagtaaatcggccaacctcacatgggaccac
aatctcgagccaggaactgactttgtgattgagtattcagacagcaaagagtcaacaaaa
attccctctgttaaggcccagtctatctcggtgaccaacctcaatcccgggattttctac
tcgttccgggtttattcccaaaacagacccgctatcaccagttccctcgtcactgttcag
actgctactgactcagctttcaccaagaaccaggtagacatcgccacccaaggatggttc
atcgggctcatgtgtgcgattgctttgctggtgctgatcctactcatcgtctgcttcatc
aaaaggagtagaggaggaaaatacccagttagagaaaagaaggatgttccccttgatcct
gaagaccagaaggaagaggatggttcctttgattacagtgacgaggacaacaagccccta
caaggaagccagacatccttggatggtaccatcaaacagcaagagagcgatgacagcctg
gtggactatggcgaggggggagaaggacagtttaatgaagatggatcttttattggccaa
tacacagtgaaaaaggacaaggaagagacagaagggaatgaaagctcagaggccacatcg
cccgtcaatgccatctactccctggcatag
DBGET
integrated database retrieval system