KEGG   Sarcophilus harrisii (Tasmanian devil): 100914572
Entry
100914572         CDS       T02286                                 
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100914572 (NFASC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:shr04515]
    100914572 (NFASC)
Cell adhesion molecules [BR:shr04515]
 Immunoglobulin superfamily
  L1 family
   100914572 (NFASC)
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set Ig_DSCAM-DSCAML_C Ig_5 V-set_CD47 C2-set_2 Ig_VEGFR-1-like_5th BiPBP_C
Other DBs
NCBI-GeneID: 100914572
NCBI-ProteinID: XP_003767682
Ensembl: ENSSHAG00000011503
LinkDB
Position
4:98690375..98931146
AA seq 1489 aa
MRLAARGAAGVEGDKRWPRQPRTLTAPGPELEPEREALDVERVSSSSQKAGTQKRESRKR
RTNPPKRLLDLCAVWESGVFHPSAGQDSASSTVSKRRVNETEKLSSLQAVQLEQQQETAR
SRGKGGWDRGPAPRMAVWTLLWIHATFSLWLFSFVGAIEVPLDPNIQNELSQPPTITKQS
VKNYIVDPRDNILIECEAKGNPAPSFQWTRNSRFFNVAKDPRVSMFRRSGTLVIDFRSGG
RPEEYEGEYQCFARNKFGTAVSNRIFLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPG
LPSPVIFWMSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKTDYSCNARFHFTHTIQQKN
PFTLKVLTTRGVSERTPSFMYPLGTSSSQMVLRGMDLLLECIASGVPAPDIAWYKKGGDL
PAGKVKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLI
LAPGEDGRLVCRANGNPKPTVQWLVNGDPLEVAPPNPSREVAGDTIIFRDTQIGSSAVYQ
CNASNDHGYLLANAFVSVLDVPPRMLSPRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFKN
GQGSNLDGGNYQVHENGSLEMTMARKEDQGIYTCVATNILGKAENQVRLEVKDPTRIIRV
PEDQVVKRGSNVVLECRVKHDPTLKLTVNWLKDDEPLYIGNRMKKEEDTLTIFGVADRDQ
GSYTCMASTELDRDIAKAYLTVLAAQVAPTNRMAPLPKERPDPPRDLELTDLEERSVRLT
WIPGDDNNSPITEYIVQFEEDQFQPGVWHSHSKHPGSVNSAVLQLSPYVNYQFRVIAVND
VGSSHPSIPSERYRTSGAPPESNPGDVKGAGSRKNNMEITWTPMNATSAFGPNLRYIVKW
RRREGRESWNNATVWGSRYMVSPTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRA
APTDVKVRVLNSTAIGLQWNRVYLDTVQGQLREYRAYFWRESSLLKGLWVSQKRQFASFS
SDRARGVVSSLFPYSNYKLEMVVVNGRGDGPRSEVKEFTTPEGVPSAPRRFRVRQPNLET
INLEWDHPEHPNGILTGYNLKYLAFNGTKTGKAVIETFSPNQTKFSIQRADPVSRYRFSL
SARTQVGPGEVVTEESPAPPNEATPTPAPTMLPPTTVSATSAASSTDVTAIATTAAATAV
PTVAPTTTTTTAATSTTTTTTSTTTTVATTASTTTTAATTTTESPPSAVTKIQDTAPYGQ
SIWNFTVKANSKSANLTWDHNLEPGTDFVIEYSDSKESTKIPSVKAQSISVTNLNPGIFY
SFRVYSQNRPAITSSLVTVQTATDSAFTKNQVDIATQGWFIGLMCAIALLVLILLIVCFI
KRSRGGKYPVREKKDVPLDPEDQKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSL
VDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq 4470 nt   +upstreamnt  +downstreamnt
atgcggctggcggcgagaggcgctgcaggcgtagaaggggacaagcggtggccccggcaa
ccgaggaccctgaccgctcctggacctgaactggagccggagcgtgaagccctggacgtg
gagagagtgagcagtagcagtcagaaggcaggaacccagaagagagaatctagaaagagg
cgaacaaacccaccaaagaggttacttgacttatgtgcagtttgggaaagtggagttttc
catccctctgctggccaggacagtgcctccagtactgtttcaaaaaggagggtgaatgaa
acagagaagctgagctctctccaggcagtccagctcgagcagcagcaagagacggcgagg
tccagaggaaaggggggctgggatcggggcccagcacccagaatggctgtgtggacactt
ctctggatccatgcaaccttcagcctctggctcttcagcttcgttggggccattgaggtg
cctctggatccaaacattcaaaatgagctatctcagcccccaaccatcaccaagcagtca
gtgaaaaattacatcgtggaccctcgggataacatcctcattgagtgtgaagcaaaagga
aaccctgcccccagtttccaatggacacgaaatagccggttcttcaacgtggccaaggac
ccccgggtgtcaatgtttcgccggtcagggacactggtgattgacttccggagtggtgga
cgacccgaagagtatgagggagaataccagtgctttgcacgcaacaagtttgggacggct
gtatctaacaggatttttcttcaggtgtcaaaatcacccttgtggcccaaggaaaatctg
gatcctgtagtggttcaagagggagcccccctgaccctccagtgcaacccccctcctggg
ttaccatctcctgtcatcttctggatgagcagctcgatggagcctattaatcaggacaag
cgtgtctcccaaggccagaatggggatctgtacttctctaatgtgatgcttcaggacgcc
aagactgactacagctgcaatgcccgcttccactttacgcacaccatccagcagaaaaat
ccattcacgctcaaggtccttaccacccgaggagtctcagagaggacgcccagcttcatg
tatcccctgggcacgtcgagcagccagatggttctgaggggcatggacttgctgctggag
tgcatcgcctcaggagtaccagcaccagacatcgcatggtacaagaaaggtggggacctc
ccagctggcaaggtcaaatttgaaaactttaataaggccctgcgtatcaccaatgtctca
gaggaggactctggggagtatttctgtttggcctccaacaagatgggcagcatccggcac
acgatctcggtgagagtaaaggccgccccttattggctagatgaacccaagaaccttatc
ctggccccaggtgaagatggaaggctggtgtgtcgggccaatgggaatcccaagcccact
gtccagtggctggtgaatggggatcctttggaagtggcacctcccaacccaagtcgtgag
gtcgctggagacaccatcatatttcgggacactcagattggcagcagcgcagtgtaccaa
tgtaatgcatccaacgatcacggttaccttctagccaatgccttcgtcagcgttctggat
gtacctcctcggatgttatcccctcggaaccagctcatcaaagtgatccattataaccgg
actcggctggactgtcctttctttggctccccaatccccaccctccgatggtttaagaat
gggcaggggagcaacctggatggtggcaactaccaagtccatgagaacggcagcttggag
atgaccatggcccgaaaagaagaccagggcatctatacttgtgtggccaccaatatcctg
ggcaaagcagagaatcaagtccgcctggaggttaaagaccccacccggataattcgggtg
cctgaggaccaggtggtcaagagaggttcaaacgtcgtgttggagtgtcgagtgaagcat
gaccccactctgaagcttacagtcaactggctgaaggatgatgagccgctctacattgga
aacaggatgaagaaggaagaggacacccttaccatctttggtgtggctgaccgggaccaa
ggaagctacacctgtatggccagcaccgagcttgaccgagacatagccaaggcctatctc
actgtgctagctgctcaggttgctccaactaaccgtatggctcccctgcccaaagagcga
ccagatcctcctcgagacctagagcttactgaccttgaggaaagaagtgtgagactgacc
tggatcccaggggatgacaacaacagccccatcacagagtacatcgtacagtttgaagag
gaccagttccagcctggtgtctggcacagccattcaaaacacccaggcagcgtcaattca
gcggtcctccagctgtccccgtatgtcaactatcagttccgagtcatcgctgtcaatgat
gttggaagcagtcatcctagcatcccatcggagagatacaggaccagtggtgcaccccca
gaatccaatccgggtgatgtaaagggagctgggtctagaaagaacaacatggaaatcaca
tggacgcccatgaatgccacatctgcatttggacccaacctccgctatattgttaaatgg
cggcggcgagaaggaagggagagctggaacaatgccacggtatggggctcccgttacatg
gtgtcgccgacccctgtctacgtgccttatgagatccgagtgcaggcggagaatgatttt
ggaaagggacccgagccagacaccgtcattggctactctggggaagattatcccagggcc
gcacccactgacgtaaaagttcgagtcctgaacagcacagccatcggccttcagtggaac
cgagtctacctggacacagtccagggtcagcttagagagtatcgagcttatttctggagg
gagagcagcttgctgaagggcctctgggtgtctcaaaagagacaatttgccagtttctcc
agtgaccgagcccggggtgtagtgtcaagcctgttcccctacagcaactacaaactggag
atggttgtggtcaatgggagaggcgatgggcctcgcagtgaagtcaaggagttcaccacc
ccagaaggagtacccagtgcccccagacgtttccgagtccggcagcccaacctggagaca
atcaacctggaatgggatcaccctgaacaccccaatgggatcctgacaggatacaatctt
aaataccttgcctttaatggaaccaagacagggaaggctgtgattgagaccttctctccc
aatcagactaagttctcaatacagagagcagaccctgtgtcccgataccgcttttcactc
agtgccaggacccaagtgggtcccggggaagtggtcacggaggagtctccagctccacca
aatgaagctactccaaccccagctcccaccatgttgcctccaactacagtcagtgcaacg
agtgcggcgagcagtactgatgttactgccatagccaccaccgccgcggccacggcagtc
cccactgtggcacctaccactactaccaccactgctgccacctccaccaccaccaccacc
acctccaccaccaccaccgtcgctacaactgcttctactaccactaccgctgccaccact
accacggagagccctccatccgccgtgactaagatacaggacactgccccctatggacag
tccatatggaacttcacggtgaaggccaacagtaaatcggccaacctcacatgggaccac
aatctcgagccaggaactgactttgtgattgagtattcagacagcaaagagtcaacaaaa
attccctctgttaaggcccagtctatctcggtgaccaacctcaatcccgggattttctac
tcgttccgggtttattcccaaaacagacccgctatcaccagttccctcgtcactgttcag
actgctactgactcagctttcaccaagaaccaggtagacatcgccacccaaggatggttc
atcgggctcatgtgtgcgattgctttgctggtgctgatcctactcatcgtctgcttcatc
aaaaggagtagaggaggaaaatacccagttagagaaaagaaggatgttccccttgatcct
gaagaccagaaggaagaggatggttcctttgattacagtgacgaggacaacaagccccta
caaggaagccagacatccttggatggtaccatcaaacagcaagagagcgatgacagcctg
gtggactatggcgaggggggagaaggacagtttaatgaagatggatcttttattggccaa
tacacagtgaaaaaggacaaggaagagacagaagggaatgaaagctcagaggccacatcg
cccgtcaatgccatctactccctggcatag

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