Sarcophilus harrisii (Tasmanian devil): 100914634
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Entry
100914634 CDS
T02286
Symbol
NECTIN1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03266
Virion - Herpesvirus
shr04514
Cell adhesion molecule (CAM) interaction
shr04517
IgSF CAM signaling
shr04520
Adherens junction
shr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100914634 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100914634 (NECTIN1)
04517 IgSF CAM signaling
100914634 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100914634 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100914634 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100914634 (NECTIN1)
04090 CD molecules [BR:
shr04090
]
100914634 (NECTIN1)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
Nectin family
100914634 (NECTIN1)
CD molecules [BR:
shr04090
]
Proteins
100914634 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
C2-set_2
Ig_3
Ig_2
ig
I-set
TM_ErbB1
Ig_6
Ig_PVRIG
V-set_CD47
EphA2_TM
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
100914634
NCBI-ProteinID:
XP_031816005
Ensembl:
ENSSHAG00000018845
LinkDB
All DBs
Position
3:complement(359484064..359670133)
Genome browser
AA seq
515 aa
AA seq
DB search
MARMEHAVVSGCWWAFALSLATLFLPGLQAQVVQVNDTVSGFIGTDVVLHCSFSNPLPTV
RITQMTWQKATNGSKQNVAIYNPNMGVSVLAPYRERVTFLQPSFTDGTIRLSRLQLEDEG
VYICEFATFPTGNRESQLNLTVLAKPTNWMEGTKKTLIARTGQTEKVLVATCTSANGKPP
STVSWDTRLKGEAEFQEIRHPNGTVTVISRYRIVPSREAHLQPLACVVNYQLDRFSESVT
LNVQYEPEVTIEGFDGNWYLKRMDVKLTCQCDANPPVTHYQWKLLNGTLPSNMDTQNKTL
IFKGPVTYSLSGTYICEATNPIGTRSGMVEVNITEFPYTPSPTEHDKRSGPGVPTPIIGG
VVGGIILVLFVALVLVLYFRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYP
DDSDDEKKAGPLGGSSYEEEEEEVGGGERKVGPPHPKFDEDVKRPYFTVDEAEARSDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggagcatgcggtcgtctctggatgttggtgggctttcgctcttagcctt
gccactctcttccttccaggtctgcaggcccaagtggtccaggtgaatgacaccgtatcg
ggcttcattggcacagatgtggtgctccactgtagcttttccaatcccctacccacagtg
aggatcactcagatgacatggcaaaaggccaccaatggctccaagcagaatgtggccatc
tacaaccccaatatgggcgtctccgtgttggctccctaccgagaacgtgtgacctttctt
cagccatccttcaccgacgggaccatccgcctctcccgtctccagctggaggatgaaggg
gtctacatctgcgagtttgctactttccccacagggaacagggagagtcagctcaacctc
actgttttagccaaaccaaccaactggatggaaggcacaaagaaaaccttgatagccagg
accggacagacagaaaaggtccttgtggccacatgtacctcagccaatgggaaaccaccc
agtactgtttcatgggacactcggctaaagggcgaggctgaattccaggagatccggcac
cccaacggcacagtgacagtgatcagccgataccgcatagtgcccagtcgagaagcccac
cttcaacctctggcttgcgttgtcaactaccaactggaccgattcagtgagagtgtcact
ctcaatgtgcagtatgaacctgaagtgaccattgaaggctttgatggaaactggtaccta
aaacgaatggatgtaaaactcacttgtcaatgtgatgccaaccctccagtcacacactac
caatggaaactgttgaacggcactctcccctccaacatggacacccaaaacaagaccttg
atcttcaaggggcccgtgacctatagcctgtctgggacctacatatgtgaagctaccaac
cccatcggcacccgctcaggcatggtagaagtcaatatcacagagttcccctacaccccg
tctccaaccgagcacgacaagcggtctgggcccggcgtccccacgcccatcattgggggc
gtggtggggggcatcatcctggtgctgtttgtggctctggtgcttgtgctctactttcgc
cggcgccgacacaccttcaagggcgactacagcaccaagaagcacgtctacggaaatggc
tatagcaaagcgggcatcccgcagcaccacccgcccatggcccagaacctccagtacccc
gacgactcggacgatgagaagaaggctgggccgctgggggggagcagctatgaggaagaa
gaggaggaagtgggtgggggggagaggaaggtcggacccccgcaccccaagtttgacgag
gacgtcaagcggccctacttcaccgtggatgaggcggaggcccgctctgacggttatggg
gaccggactcttggctaccagtatgaccccgagcagctggacttggctgagaacatggtt
tctcagaatgacgggtctttcatttccaagaaggagtggtatgtgtag
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integrated database retrieval system
