Sarcophilus harrisii (Tasmanian devil): 100914811
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Entry
100914811 CDS
T02286
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100914811 (SRRM1)
03015 mRNA surveillance pathway
100914811 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100914811 (SRRM1)
03041 Spliceosome [BR:
shr03041
]
100914811 (SRRM1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100914811 (SRRM1)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100914811 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
100914811
NCBI-ProteinID:
XP_031818432
Ensembl:
ENSSHAG00000011061
LinkDB
All DBs
Position
3:complement(558318101..558355731)
Genome browser
AA seq
916 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRASPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEEIPELPEPSVKAKEPSIQEATS
TSDILKAPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRTRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRISSPPRKTRRLSPSSSPPRRRHRPSPPASPPPKTRRSPTPQQS
NRTRKSRGSVSPGRTSGKATKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSNVKNGEVGRRRRHSASRSASPSPRKRQKES
SPRMQMGKRWQSPMIKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPPPPRRRTPS
PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKP
RSSPVTKRRSPSLSSKHRKGSPPSRSTRETRSPLPNKRHSPSPRPRVPHTSASPTPLRRG
ASSSPQRRQSPSPSTRPIRRVSRTPEPRKAKKAASPSPQSVRRVSSSRSASRSPEPAAKK
HQAPPSPTQSQSPSTNWSPAAPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDK
KHKKHKKHKKEKAAAAAAAAAAVASTTTSAQEEPEAETEPKKETESEAEDNLDDLEKHLR
EKALRSMRKAQVSPQS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggacaatcgtttcagcaataaa
cagaagaagctactgaagcaattgaagtttgcagaatgtctagaaaaaaaggtagacatg
ggcaaagtaaatttggaggtgataaagccttggattacaaaacgagtaacagaaattctt
ggatttgaggatgatgtagtaattgaattcattttcaaccagctggaagtgaagaatcca
gattccaaaatgatgcagattaacctgactggattcttgaatgggaaaaatgctagagaa
tttatgggagagctgtggcccttgttgttgagcgcacaggaaaacattgctgggatccct
tctgctttcttggaactgaaaaaggaagaaataaaacaaagacagattgaacaagaaaaa
cttgcatctatgaagaaacaagatgaagacaaagataagagggacaaagaagaaaaggag
agcagcagagaaaaaagggaacgatctagaagccccagaagacgcaagtccagatctcct
tcccccagaagacgagcctcccctgtccgacgagagagaaagcgaagtcattctcgatct
cctcgtcatagaaccaagagccgaagcccttcccctgctccagaaaagaaagaagaaatc
ccagaacttccagaaccttcagtgaaagccaaggaaccttcaatacaagaggcaacctct
acaagtgacattctgaaagctcccaaacctgaacctataccagaaccgaaggaaccttca
ccagaaaaaaattcaaaaaaggaaaaagaaaaggagaaaacccgcccaaggtctcgatca
cgatccaaatcgagatcacgaacacgttcccgatccccttctcatactcgacctagacga
cgtcatagaacacgatcgaggtcatattcacctagaagacgtccaagtccaagaaggcgg
ccatctcctcgacgaagaaccccaccaagacgaatgcctcctccaccaaggcatagaaga
agtcgatctcctgtgagacgaaggcggcgctcatcagcatctctctctggcagcagctcg
tcatcatcatcttcccgttcccggtcacctccaaagaagccacccaaaagaatctccagc
ccccctagaaaaactcgtaggctttctccatcttcaagtcctccacggcgaagacatcgg
ccatctcctccagcaagcccaccgccaaaaacccgtcggtcaccaacgccccagcagtca
aatcgtacaaggaaaagtcgtggctctgtttctccagggagaacctcaggtaaagcaaca
aaacataaaggtaccgagaaaagagagtcaccttcaccagcaccaaaacctcggaaagta
gagttatccgaatcggaagaagacaaaggtggcaaaatggcagcagcagattccgtgcaa
cagaggcgacagtaccggagacagaaccagcagtcttcttctgactctggctcctcctcc
tcctcagaagacgaacgaccgaagagatcaaacgtgaaaaatggagaagtgggaagacgt
cgacgacattcggcctctcggagtgcatccccatcaccacggaaacgccagaaagagtcc
tctcctcggatgcagatgggaaagagatggcaatcgccaatgattaaaagtagtaggcgg
agaagaagtccatcacctccaccggctagacgacggcgttccccttctccggcccctcca
ccccggcggcggcgatctcccacaccaccacctccaccaccacggcgcaggactccttct
cctcccccacgtcgacgctcaccttctccaagaagatactctcctccaatacagagaaga
tactctccttccccgcctcctaagagaagaacggcttccccaccaccacctcccaagcga
agggcatcaccttcgcctcccccaaagcgacgggtctcccattctccacctccgaagcca
agaagttcccctgttacaaagagacgttccccttccttatcttctaagcataggaaaggg
tccccccctagccgatccacccgagaaacccggtctcctctaccaaacaaacggcattca
ccttcaccacggcctcgagttcctcatacctctgcaagtcctaccccactccgaagagga
gcttcatcttcaccccaaagaaggcagtccccatcaccaagcactaggcctatcaggaga
gtctccagaaccccagagcccagaaaagcaaaaaaggctgcctcaccaagtccccagtct
gtaagaagggtctcatcctccagatctgcctccagatctcctgagccagcagctaagaaa
caccaagcacctccatcccccacccagtctcaatccccatccacgaattggtcgccagca
gcacctgtcaagaaggctaaaagccccacaccaagcccatcccctgccaggaattcagac
caggagggtggtgggaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggacaag
aagcacaaaaaacacaaaaaacataagaaggagaaggctgcagcggctgccgctgctgct
gctgccgtagcatccaccaccacatcagcccaggaagagcctgaagcagagacagagccc
aaaaaggagactgagagcgaagctgaagacaacctggatgatctagagaaacaccttcgg
gaaaaggcgctgaggtcgatgagaaaggcgcaagtgtccccacagtcctag
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