Sarcophilus harrisii (Tasmanian devil): 100914838
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Entry
100914838 CDS
T02286
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100914838 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100914838 (CHRNE)
Ion channels [BR:
shr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100914838 (CHRNE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
100914838
NCBI-ProteinID:
XP_012404230
Ensembl:
ENSSHAG00000005202
LinkDB
All DBs
Position
4:288759559..288768696
Genome browser
AA seq
494 aa
AA seq
DB search
MEGTVLWILLLQGLLDLGWGRSEELRLYHHLFNRYDPTRRPVRGPEEKVSVNFKVTLTNL
ISLNEKQETLTTSVWIGIDWIDHRLNYSSKDFGGITTLRVPANLVWLPDIVLENNIDGVF
GVAYEANVLVSEGGFVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYSAAEVAIVF
SEESGQVLNKIQIDAEAYTENGEWAIDFCSGQIWLHDDRPVDAPGNVEVIYTLIIRRKPL
FYIINIIVPCVLISGLVLLVYFLPAQAGGQKCTVSISVLLAQTVFLFLMATKIPETSLSV
PLLGRYLIFVMVVAALIVMNCVIVLNVSLRTPNTHVMSPRLRYVFLELLPGLLGSTPRPP
APGAASSQRRASSQGILLRAEELILRKPRSELLFEGQRHRHGTGPAASTAALCQSLGTAS
AEIRCCVDAVNFLAENMREQEDSGEEVSSWVLVGKALDNICFWAALVLFGFGTGLIFLGG
HLNQVPDLPFPPCM
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggagggaactgtgctctggatactgcttcttcaagggcttctggaccttggatggggg
aggagtgaggagcttcggctttatcaccatctcttcaatcgctatgatcctacccgaagg
ccagtaagagggccagaagaaaaagtttctgtcaatttcaaggtcaccttgactaatctt
atctccttgaatgagaaacaagagactctcactaccagtgtttggattggaattgactgg
attgatcatcggctgaactacagcagtaaggacttcggaggcatcaccacgctgagagtc
cccgctaacctggtgtggcttcccgacatcgtgctggagaacaacatagacggagtgttt
ggagtggcctacgaggccaacgtgctggtgagcgaaggcggctttgtgagctggctccct
cccgccatctaccgcagcacctgcgcagtagaagtcacctactttccctttgactggcaa
aactgctccctgatctttcggtctcagacgtacagcgctgcggaagtggccattgtcttc
tcggaggagtctggccaggtgctaaacaagatccagattgatgcggaggcctatacggag
aacggggagtgggccatcgatttctgttctggacagatctggctccatgatgaccgcccc
gtggatgcgccagggaacgttgaagtcatctacacactcatcatccgaaggaagcccctt
ttctacatcatcaatatcatcgtgccctgtgttctcatctcaggcctcgtactcctagtc
tacttccttcctgcgcaggcgggtgggcagaagtgtacagtctccatctccgtcctcctg
gcccagaccgttttcctgttcctcatggcgacaaaaataccagagacttctctgagcgtc
cctttgctggggaggtatctcattttcgtcatggttgtagcagctctgattgtcatgaat
tgcgtcatcgtgctcaacgtctctctaaggacgcccaacactcatgttatgtctcctcgg
ttacgttatgttttcttagaattgttgccaggtcttttgggttctactccacgtccgcca
gcgccaggggcagcttcttcccaacggagggcttcttctcagggaattctgctccgtgcg
gaggaactgatcctgaggaagccccggagcgagctgctatttgaagggcaaagacatcgg
catgggacaggaccagctgcctccactgccgcactatgtcagagtctgggaactgcttca
gctgagattcgttgctgtgtagacgcggtgaacttcttagcggaaaacatgcgggagcag
gaagactctggggaggaagtttccagctgggtccttgtgggaaaagccttggacaacatc
tgcttctgggcagccctcgtgctctttgggtttggcacaggccttatctttcttggtggt
cacctgaaccaggtgcctgacttgccctttcccccttgtatgtag
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