Sarcophilus harrisii (Tasmanian devil): 100914852
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Entry
100914852 CDS
T02286
Symbol
PROM1
Name
(RefSeq) prominin-1 isoform X4
KO
K06532
prominin 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100914852 (PROM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100914852 (PROM1)
04090 CD molecules [BR:
shr04090
]
100914852 (PROM1)
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100914852 (PROM1)
CD molecules [BR:
shr04090
]
Proteins
100914852 (PROM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF948
DegQ
ATP-synt_I
AI-2E_transport
Claudin_2
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
100914852
NCBI-ProteinID:
XP_012407769
Ensembl:
ENSSHAG00000018318
UniProt:
G3X1S4
LinkDB
All DBs
Position
6:complement(7211489..7343668)
Genome browser
AA seq
860 aa
AA seq
DB search
MALVLCLPLLLALLRGPVSEAQAGPRTTPGTLDLGYLPAGNYETNIQVDSGPIEILFRVV
RAFLFVVQPNPFPEDLITKTVQRKFEYIKSDYQKVVHYELGFLILAVLGLLFVVLLPLVG
LCFCMCRCCNNCGGEMHQRQKKNGDCRRRGFAASLLVISLIMSIGVFCAFAANHHLTMQI
KGVQPLIKSNFKDLRTLLTHTPEQIDYLVNQFNIPKNQALLDLDNIGPLLGGRVQDQLGK
QVLPALDAVLTMAGAIQETRESLENVNASIEILQEGTHRLSANLTRARENLNNTLNDDAC
SEARAASTCSVIRNSLNQLSINANFSRLPPVTSQLAKVNDVLRIDLAHLVQKGYAAFNNT
PKLVKNQTENIIADIKSTLDSIGTNITDAIKALPIQKMINDFKLYLTQTETYVDTYFPLV
KQYDFYRWLCGIIACCLLILILVFYFLGLLCGACGFNKHKTPTTRGCVSNTGGNFLMAGV
GFSFLFSWALMSLVVSTFVLGGNVEKLVCEPFKDRTIFQVLDTPYLLNAQWKNYLPGVLF
KNADVNLTFKQVYSDCKENKGIYTSLQLDKFYNISKFLAINQYTEDLTFTFDSIKINLST
IVLLDEVGKQNLLNFSFSGIDGIDFAAYLTEVNKSITKVDLLSFANELEARAEQLPKGAL
ENALKGHASNIRMIHHQHVIPLEQEMSTLNQSIRLLQKTSSELMVKVSQVLATVESAQLL
INNNASFIIIEETKKFMGMIIDYFEQYFQWVKDSITMDVAACKPLANIIDTAVEMFLCSY
ITNSMNAFWFGLGGATIFLVPALILAVKLSKHYRRMDSEDVYDDVETLPMKNMENGNYGY
HKDHLYGLHNPVMTSAMEQW
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgtcctctgcttaccgctgctgctggcgctgctccgagggcccgtttccgag
gcgcaggctgggccccggaccaccccgggaacgctggacttgggctacctccctgctggc
aactatgagactaacatacaagtcgattcggggcccatcgaaattttgttccgagttgtc
cgagccttcctttttgtggtgcagcccaaccctttccctgaagacctcatcacaaagacc
gtacaacgaaaatttgaatacataaagagtgattatcagaaggtggtccactatgagctc
ggctttctcatcctggccgtcctgggattgctgtttgtggtgctgctgcccctcgtgggg
ctgtgcttctgcatgtgccgctgctgcaacaactgcggaggggagatgcaccagcgacag
aagaagaacggggactgtcgccggcggggcttcgccgcttcgctcctggtgatttccctg
ataatgagtattggtgttttttgtgcctttgccgcaaaccatcatcttaccatgcaaatt
aaaggagttcagcccctaataaagagcaattttaaagacctgagaactcttctgacccat
actccagagcaaattgattatctagtgaaccaattcaatatcccaaagaatcaagcactg
ttagatcttgacaatattggaccattactcggaggccgagtccaagatcagttaggaaag
caagtcctcccggctcttgatgcagttctaactatggcaggagcgatccaggaaacccga
gagtccctggagaacgtgaacgcctccatagagatcctccaggagggcacccacaggctc
agcgccaacctcacccgggccagggagaacctaaacaacaccctcaacgacgacgcctgc
tccgaggctcgggccgcctccacctgcagcgtcatcaggaactcactgaaccagctgagc
atcaatgccaacttcagccggcttccaccagtgacctcacagcttgctaaagtcaacgat
gttcttagaattgatttagcccatctggtccaaaagggatatgcagcatttaataatacg
cctaaattggtgaagaatcaaaccgagaatatcatagcagatatcaaaagtactttggat
tccatcggcacaaatatcactgatgcaatcaaagcgcttcctattcagaagatgataaac
gatttcaaactttatcttactcagactgagacatatgttgacacttacttccctttagtg
aaacaatatgatttctatcgatggttgtgtggtataatcgcctgctgcttgttgatcctc
atcctggtcttttacttcctggggttactatgtggagcctgcggttttaacaagcacaag
acccccaccacccgtggctgtgtgtccaacactggaggcaacttcctcatggctggcgtt
ggattcagtttcctgttttcctgggcattgatgagcttagtggtttccacctttgttttg
ggtggaaatgtagaaaaattggtctgtgagccctttaaagacaggactatatttcaggtt
ttggatactccttatttactcaacgcccaatggaaaaactaccttccaggtgtcctgttt
aaaaatgctgatgttaatctcacctttaaacaagtttacagtgactgcaaagaaaataaa
ggcatttatacctctctgcagcttgataaattctacaatatcagcaaatttctggccatt
aatcagtataccgaagatctaacatttacatttgacagtattaaaataaaccttagcacc
atagttttactggatgaagtaggaaaacagaaccttctgaattttagtttctcaggaata
gatggaattgattttgctgcttatttgactgaggtcaataagagtataacaaaagtggat
cttttgtcctttgccaatgaattggaagcaagagcagaacagttgcccaaaggagctttg
gaaaatgccctgaaagggcatgcaagcaacattcggatgatccatcatcaacatgtgatc
cctctggagcaagaaatgagcactttaaatcaaagtatcaggctattacaaaagacatca
tccgagcttatggttaaagtgtctcaagtccttgccactgtggaaagtgctcagctcctc
attaataataatgcgtcctttattattattgaggaaactaagaagtttatgggtatgatc
atagactactttgaacagtattttcagtgggtcaaagattcgatcaccatggatgtggca
gcctgcaaaccccttgccaacatcatagatactgctgttgaaatgtttctgtgcagctat
atcactaactctatgaatgcgttctggtttggcttgggaggtgccaccatatttttagtt
cctgctctcattcttgccgtaaagctatccaaacattatcgtcgaatggattcagaagat
gtctatgatgatgttgaaactttacccatgaaaaatatggaaaatggtaattatggttat
cataaagatcatttatatggtcttcacaatcctgttatgacaagtgccatggaacagtgg
tag
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integrated database retrieval system
