Sarcophilus harrisii (Tasmanian devil): 100915070
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Entry
100915070 CDS
T02286
Symbol
RBBP7
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K11659
histone-binding protein RBBP7
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100915070 (RBBP7)
03083 Polycomb repressive complex
100915070 (RBBP7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100915070 (RBBP7)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100915070 (RBBP7)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
100915070 (RBBP7)
PRC2.2
100915070 (RBBP7)
Chromatin remodeling factors
NuRD complex
100915070 (RBBP7)
NuRF complex
100915070 (RBBP7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
WD_LRWD1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
100915070
NCBI-ProteinID:
XP_031814805
Ensembl:
ENSSHAG00000001584
UniProt:
G3VF23
LinkDB
All DBs
Position
3:195433733..195462559
Genome browser
AA seq
448 aa
AA seq
DB search
MDYEEEHSNTNRSTNLQRRRSWRSSSQSVFEDTVEERVINEEYKIWKKNTPFLYDLVMTH
ALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPNDDAQFDASHY
DSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHP
SKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVD
AKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNC
LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT
DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI
MQIWQMAENIYNDEEPDIAASELEGQGS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaagaggagcattcaaatacaaataggagcacaaatctccaaagaagaaga
agctggaggtcaagtagccaatcagtgtttgaagatacagtggaagaacgggttatcaat
gaagaatataaaatctggaaaaagaataccccatttttgtatgacttggttatgacacat
gctcttgaatggcccagtcttactgttcagtggcttcctgatgtaactagaccagaagga
aaagattatgcccttcattggctagtactggggactcatacttctgatgagcagaaccat
ttagtcgttgcacgagtacagattcctaatgatgatgcacagtttgatgcttcccattat
gatagtgaaaaaggagaatttgggggctttggatctgtaactggaaaaattgaaactgaa
ataaaaataaatcacgaaggagaagtaaatcgtgcacgttacatgccccagaatccttgt
attattgctacaaaaacaccatcttctgatgtattggtttttgattatacaaaacacccc
tctaaaccagacccaagtggagaatgtaatcctgatcttagattaagaggtcatcaaaag
gaaggttatggtctttcctggaactctaacttgagtggacatctcctaagtgcatctgat
gaccatactgtctgtttatgggatataaatgcaggcccaaaggaagggaaaattgttgat
gccaaagcaatctttactggtcattctgctgttgtagaagatgtggcatggcatctactc
catgaatcattgtttggatctgttgctgatgaccagaaacttatgatctgggataccagg
tccaatacaacatctaagccaagtcattctgtagatgcgcatacggctgaggtcaactgt
ctgtcatttaatccatacagtgaattcattttagcaactggctcagctgataagactgta
gctttgtgggatctgcgtaatctaaaattaaaactacactcctttgaatctcataaagat
gaaatcttccaggttcactggtctccacataatgaaactatcttggcttcaagtggtact
gatcgacgtcttaatgtatgggacttaagtaaaattggagaagaacaatcagctgaagat
gcagaagatggtcctccagaacttctgtttattcatggaggacacactgccaagatatca
gattttagttggaatcccaatgaaccttgggtaatttgttctgtttctgaggataacatc
atgcaaatatggcaaatggctgaaaatatttacaatgatgaagaaccagatatagcggca
tcagaactggagggtcaaggatcctaa
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