Sarcophilus harrisii (Tasmanian devil): 100915566
Help
Entry
100915566 CDS
T02286
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03250
Viral life cycle - HIV-1
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100915566 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100915566 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100915566 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100915566 (NUP153)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100915566 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
100915566
NCBI-ProteinID:
XP_031802667
Ensembl:
ENSSHAG00000016087
LinkDB
All DBs
Position
1:543903175..543976105
Genome browser
AA seq
1489 aa
AA seq
DB search
MASGAGGGGGGGKIRTRRCHQGPTKPYPRGRQQQQQQQQQGILSRVTESVKNIVPAWLQK
YFNKNETAYVHSDDNRESRHWQENTQNDHLLYTDEENPIINDGRITPDPAISNTEEPSTS
RSALNYPDVLTRPSLHRSHLNFSMLESPTLHCQPSTSSAFPIGSSGFSFVKEIKDSTSQH
DDDNISTTSGFSSRASDKDIAVSKNTSGPPLWSPEAERTHSLSQHTATSSKKPAFNLSAF
GTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKIRSTPYQAPVRRQMKAKQI
NSQSYGVTSSTARRILQSLEKMSSPLADAKRIPSAFSSPLSSPLDRSGLDIADIQAKRKK
MESHCPPVQRLMTPKPISIATSRSVYFKPSLTPSAETRKTNQRIDKKHNIGHEKNLSPGQ
KVEQHESDFSYPNFSTPATNGLSSGVGGGGKMRRERTRFVSKLPEDEEEVEAPVLPKIPL
PITTTALPVFSFCSSLSTSSYLSPISATQSLSNKVQAASPNNAGSPVFRFSSPIVKSTEA
DILPPTSIGFTFSVPVVKSSEIPASSNISESTISSSVKDSTTINSTSNKKEENEDYEGPF
RPAKTLKEGSVLDILKSPGFTSPKTGSPAAVQPATTSIEVYTRPAISTFSSSGPGFGETF
KAGTTWQCDTCLVQNRVTDNKCVACQAAKVPPKDTAKQTGMTTPSNSVRSALPTAGTLGF
GDKFKPAVGTWDCDTCLVQNKSEATKCVACETPKPGTGVKQTLTLPVASENAVTVTPSSS
SYTLTDTLGFGDKFKKPKDSWECLVCCVLNKGEDSKCVACMSEKPGGGSVPVPCSNTTSV
SMPSGGFLGLDKFKKPEGSWDCEMCLVQNKADDTKCVACESAKPGTKSEFVGFGTPSSSL
DCGAPSFKFGIPASISESSQMVASTGSFKFGEQGGFKLGVSSDPASSNPMSGGFKFSKPV
GDFKFGVSSSDCKSEESKKDSKNDNNFNFGVPSCISNPSTSVSFQFGSSSSGPQEKKEEL
KTSTTAGFTFGTNVTAGLTSSAATVTMAPSENKAGVGGFSFGSTETKNMAVTPFAFKKPE
ENKEETPAAKGGGFSFGSVESACLPSASVFVMGRTEEKQQEPVTSATSLVFGKKADSEEP
KSQQVFSFGNSEQTKDESTAKRAFSFNLTKPVENQTEPSAKVLFAFGTQTNTTSDQGATK
TVFNFLSSSSSNSNAPTPTTSSGGGMFGGIASASNPPVAAFMFGQPSSSGTSSAFGNPTD
SSTSPSFVFSQENKPATTSSTGVAVGPFVFGTGANSSNTSSSTFSFGATTPSVSAGSSSF
VFGAGSSTSSASPVFGTSQTPAFGQSTSQSSTPGFGSLSSSTLFSSSSQPSTPAFGSVSS
SNQPPVFGQAPTQQPGFGSGTTSNSSSVFHFGSSTANFNFTNNNPSGIFTFGANAGTPAA
SAQPSGSTGFPFNPSPAAFTVGTNGKNMFSTSGTSVSGRKIKTAVRRRK
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagctggaggagggggcggcggcggcaagatccggacgcggcgctgccac
cagggcccaaccaagccctacccgcggggacggcagcagcagcagcagcagcagcagcag
ggcatccttagtagagttacagaatctgttaagaacatcgtcccagcatggctacagaag
tatttcaacaaaaacgaaactgcctatgtacattcagatgacaacagggaatcaagacat
tggcaagagaatacacaaaatgatcatcttttatatacagatgaggaaaacccaattatt
aatgatgggagaatcactccagatccagcgatcagtaatacagaagaaccttcaacaagt
agatctgctttaaattatccggatgttttaacaaggccttctcttcatcggagccactta
aatttctccatgttggaatccccaacattacactgtcagccatccacatcctcagcattc
ccaattggcagttctgggttctcatttgtaaaagaaatcaaagattctacctctcagcat
gatgatgataacatctcaactaccagtggtttttcttccagagcttctgataaagatata
gctgtttcaaagaacacttcagggccaccgctatggtcccccgaagctgaacgtactcat
tcgctctcacagcatactgccaccagctcaaagaaaccagcattcaacttgtctgccttt
ggaacactttccccttcacttgggaattcttcaatacttaaaacaagccagctcggagat
tctcctttttaccctggtaaaacaacttatggtggtgctgcagcagctgttagacagtct
aaaatacgaagtacaccttatcaggcaccagttagaagacagatgaaagccaaacaaatt
aattcacaatcttatggagtaactagttcaacagcccgacgtatattacagtctttggag
aagatgtcaagccctctagcggatgcaaaacggatcccatctgctttttcttctccacta
tcttctcccctggataggagtgggttagacatcgcagatattcaggctaaacggaaaaag
atggaatcccactgtcctcctgttcaaagactcatgaccccaaagccaatttctatagca
accagtcggtcagtgtattttaaaccatctttaactccatctgctgaaacaagaaagact
aatcagagaatagataaaaagcacaatattgggcatgagaaaaatctatctccggggcaa
aaagtagagcaacatgagagtgatttttcatacccaaacttcagtacacctgccaccaat
ggactctcttcaggagtgggtggtggtggcaagatgcgacgggaaagaacccgttttgtg
tctaaacttcctgaagatgaagaggaagtggaagcaccagtactaccaaaaatacccctg
ccaattactactactgcattgcctgtcttcagtttttgctcttctttgagtacctcttcc
tatctatcacccatcagtgctacacagtcattgtcaaataaggtacaagcagcctctcca
aataatgctggcagtcctgtattcagattttcatctccaattgtaaaatctactgaggca
gacatactacctcctacatctattggatttacatttagtgtgcctgttgtgaaatcatca
gaaattcctgcctccagtaatatttcagaatcaacaataagtagttcagttaaagattcc
accactataaatagcacaagcaataagaaggaggaaaatgaagattatgagggccctttc
aggcctgcaaaaaccctgaaagaagggagtgtactggatattctgaaaagtcctggtttc
acatctccaaagactggttctcctgctgctgtacagcctgctacaacaagcatagaagtt
tataccagacctgcaataagtaccttttcttctagtggaccagggtttggtgaaactttt
aaagctggaactacttggcaatgtgatacatgtctagtgcagaacagagtgacagacaat
aaatgtgtagcctgtcaagctgctaaagtgccaccaaaagatactgctaaacaaactgga
atgacgacaccaagtaactctgtacgatcagctcttcccacagcagggactttaggtttt
ggagacaaatttaaaccagcagtgggaacttgggattgtgatacctgtttagtacaaaat
aaatctgaagctacaaaatgtgtggcttgtgaaacaccgaaacctgggactggagttaag
caaaccttgacattgccggtggcttcagaaaatgcagtaactgtgactccttcatcttcc
agttatactctcactgataccttgggatttggagataaattcaaaaaacccaaggattct
tgggaatgtttagtgtgctgtgtattgaataaaggagaagacagtaaatgtgtggcctgt
atgtctgaaaaaccaggaggaggttcagtacctgtgccatgtagtaatacaacttctgtt
tccatgccttctggaggatttctaggattggacaaattcaagaaacctgagggaagttgg
gactgcgaaatgtgcttggtacagaacaaagcagacgacacaaagtgtgtagcatgtgaa
agtgcaaagccaggcacaaaatcagaatttgtaggttttggcaccccttcttcatcttta
gactgtggagccccatccttcaaatttggtattccagcatccatttctgagtcttctcag
atggtagcaagcacaggaagttttaaatttggtgaacaagggggcttcaaattaggcgtg
tcatcagatcctgcatcttcaaaccccatgagtgggggctttaagttttctaaacctgta
ggggacttcaagtttggagtttcatcttctgactgtaaatcagaagagagtaaaaaagac
agtaagaatgataacaattttaactttggagttccttcttgcataagcaatccatctact
tcagtgtcatttcagtttgggtcatccagttctgggccacaagaaaagaaagaggagctt
aaaacatctacaacagcaggcttcacatttggtacaaatgttactgctggtctcacctct
tctgctgccactgtcaccatggccccctctgagaataaggctggagtgggtggcttcagc
tttggatccactgaaacaaaaaatatggcggtgactccttttgcatttaagaagccagag
gaaaataaggaagaaactcctgcagccaagggaggagggttcagttttggcagcgtggaa
tcggcttgtttaccatctgcttcagtgtttgttatgggaaggacagaggagaaacaacaa
gagcctgttacctcagctacttctctagtatttgggaagaaagctgacagcgaggagcca
aagtctcaacaggtgttttcctttgggaattctgagcaaaccaaagatgaaagtacagca
aaacgtgcatttagttttaacttgacaaaaccagtggaaaatcaaactgagccgtcagca
aaggtcctatttgcttttgggactcagactaatactacatctgatcaaggagcaacgaag
acagtcttcaatttcttgagcagtagttcctccaactcaaatgcaccaacaccaactact
tctagtggtggtggtatgtttgggggtatcgcctctgcctccaacccacctgttgctgcc
tttatgtttggacagcccagctcttcagggaccagttctgcctttggtaaccccacagat
tccagtacatctccgtcttttgtgttttctcaagaaaacaaaccagccaccacgtctagc
acaggtgttgctgttggtccatttgtttttggcacaggagccaatagcagtaacacttcg
tcctccaccttcagttttggagctacaacaccgtctgtctctgcaggttcctcttccttt
gtatttggtgctgggtcttcaacatcttctgccagtcctgtatttggtaccagccagacc
ccagcatttggacaaagtaccagtcagtctagtactccagggtttggatcgttatcatcg
tcaacattattttcatctagttcccaaccctcaacccctgcttttgggtcagtgtcaagt
agcaaccaacctcctgtctttggacaagcgcctactcagcaacctggatttggttctgga
acaacttctaattctagttctgtgttccattttggaagcagcactgcaaatttcaacttc
acaaacaacaatccatcaggaatattcacctttggtgcaaatgctggtacacctgccgcc
tcagcccagccttcaggctcaacaggatttccatttaacccatctccagcagcatttaca
gtggggacaaatggaaaaaatatgttttctacttctggcacttcagtttctggtcggaag
ataaaaactgctgttaggcgcaggaaataa
DBGET
integrated database retrieval system
