Sarcophilus harrisii (Tasmanian devil): 100915632
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Entry
100915632 CDS
T02286
Symbol
SF1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1
KO
K13095
splicing factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100915632 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100915632 (SF1)
Spliceosome [BR:
shr03041
]
Complex A
Other components
Complex A specific factors
100915632 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
CHP02642
Motif
Other DBs
NCBI-GeneID:
100915632
NCBI-ProteinID:
XP_031797472
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All DBs
Position
6:242405200..242419064
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AA seq
684 aa
AA seq
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MATGANATPLGKLHPPAAAPPGLPPGPGPKRAFEPPPPPPPPGPGGGGAGPPLGPVGPGL
MAAPLAAAFPFAALPPPPRRRRRPPPPPAWPPPPPQPPALPGPCVPQAQPPLPPLACAAP
PLFQHVSPPQPPPQPLQDPQPGPAGGGGDFPNKKRKRSRWNQDTMEQKTVIPGMPTVIPP
GLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTR
KKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKC
GGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASAGSASGPAAAPLAS
APRPAAPANNPPPPSLMSTTQSRPPWMNSGPSENRPYHGMHGGGPGGPGGGPHNFPHPLP
SLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYR
LHQGKGMMPPPPMGMMPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPL
PWQQRPVPAAVARAMRLRTFRAHW
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctgggtaagctgcacccgccggccgcggccccg
cccggcctccccccggggcccgggcccaagcgggccttcgagccgccgccgccgccgccg
ccgccggggccgggggggggcggggcggggccgccgctggggcctgtgggcccggggctg
atggcggcgccgctggccgcggccttccccttcgcggcgctgccgccgcctccccgccgc
cgccgccgtccgccgccgcccccggcctggcctccgcccccgccacagccgcccgcgctg
ccgggcccctgcgtaccgcaggcgcagccgcccctgccgccgctcgcctgcgccgcgccg
ccgctcttccagcacgtgtctccgccgcagccgccgccgcagccgctccaggacccgcag
ccgggcccggccggcgggggaggagatttccccaataagaagcggaagaggagccgctgg
aatcaggacacgatggaacagaagaccgtgatcccgggcatgcccaccgtgatccccccg
ggcctgacgagggagcaagaaagagcttacatagtgcaactgcagatagaagacctgact
cgcaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtccccttcc
cctgagcccatttacaatagcgaggggaagcgcctcaacacaagggaatttcgcacccgg
aagaagctggaggaagaaagacacaacctcatcaccgagatggtggcgctcaatcccgac
ttcaagcctcctgcagattacaaacctccagcgacccgggtaagcgacaaggtgatgatt
ccgcaagatgagtatccagaaatcaactttgtgggacttctcattgggcccaggggcaac
acgttgaagaatattgagaaggagtgcaacgccaagattatgatccgggggaaaggatct
gtgaaagaaggcaaagtcgggcgcaaagatggacagatgctgcccggggaggatgagccc
ctccatgccctagttactgccaataccatggagaatgtcaaaaaggcagtggaacagatc
cggaacattctgaaacaaggcattgaaaccccagaggaccagaatgatctccggaagatg
cagcttcgagagttagcccgccttaacgggactctacgggaggatgacaacaggatctta
agaccatggcagagctcagagacccgaagcatcaccaataccacagtctgcaccaagtgc
ggaggggctggccacattgcttcagattgcaagttccaaaggcctggtgacccacagtcg
gctcaggacaaagcccgcatggacaaggaatacctgtctctcatggcagagctgggcgaa
gctccagttccagcttctgcgggctcagcctctgggcccgccgccgccccgctggccagt
gcgcctcggcctgccgcccctgccaacaacccgccgccgccgtctctcatgtccaccact
cagagccgcccaccatggatgaactcggggccctcggagaatcgcccgtaccacgggatg
cacggcggagggcccggtggccccggcggcgggcctcacaacttcccacacccgctgccc
agtctgacggggggacacggtggtcaccccatgcagcacaaccccaatgggcccccgccc
ccctggatgcagccgccaccaccgccgatgaaccaggggccccacccacctgggcaccat
ggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtctatcgc
ctacatcaaggaaaaggtatgatgccgccgccgcctatgggcatgatgccgccgccgccg
cctcccagtgggcagcccccaccccctccctctggccctcttcccccatggcagcagcag
cagcagcagcctccgcctcccccgccgcccagcagcagtatggcttccagtacccccttg
ccatggcagcaaagacccgtccccgcggcggtggcccgcgccatgcgactgaggactttc
cgcgcccattggtga
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