KEGG   Sarcophilus harrisii (Tasmanian devil): 100915683
Entry
100915683         CDS       T02286                                 
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
  KO
K10653  tripartite motif-containing protein 54
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:shr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100915683 (TRIM54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shr04121]
    100915683 (TRIM54)
Ubiquitin system [BR:shr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100915683 (TRIM54)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 zf-B_box zf-RING_5 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_6 TRIM_CC DUF8512 Sina_RING CoiA_N UvrD_C GH123_cat FlgN DUF1421 DUF349 DD_DDX21-DDX50 Zn_ribbon_FGT1_2 SesA zf-RING_11
Other DBs
NCBI-GeneID: 100915683
NCBI-ProteinID: XP_003767166
Ensembl: ENSSHAG00000013044
UniProt: G3WIP5
LinkDB
Position
2:complement(213954532..213988081)
AA seq 361 aa
MNFPVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPNIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLGQRFETLCAVLEERKAELLQVLAREQE
EKLQRIRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIKKVGDMAKVELAG
RPEPGYESMEQFSVNVEHVAEMLRTIDFQTGGSGEEEEEELVLEGEDGSAGAEEEKLEAS
T
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaacttcccagtgggtttcaagccgctgctgggggatgcacacagcatggataacctg
gagaagcaactcatctgccctatttgcctggagatgttttccaaaccagtggtgatcctg
ccctgtcaacacaacctgtgccgcaagtgtgccaatgatgtcttccaggcttcaaatcct
ctgtggcaatcccggggttccaccacagtgtcctcagggggacggttccgttgcccatcc
tgtaggcatgaggttgtcctggacagacatggtgtgtatggactgcagcgcaatctgctg
gtggagaacatcattgacatttacaagcaggagtcttcacggcctctgcattctaaagca
gagcagcacctgatgtgcgaagagcacgaggaggagaagattaacatctattgcctgagc
tgcgaggtgcccacctgctccctctgcaaggtgttcggtgctcataaggactgcgaggtg
gcccctctgcccaacatctacaaacgccagaagagtgagctgagcgacggcattgccatg
ctggtagctggaaatgaccgggtccaagcagtcattactcagatggaagaggtgtgccag
actattgaggacaatagccgcaggcagaagcagctactgggacagaggtttgagacgctg
tgtgcggtgctggaagagaggaaagcagaattgcttcaggtcctggcccgggagcaggag
gaaaagcttcagcggattcgagggctcatccgtcaatatggagaccatttggaggcctcg
agcaagcttgtggaatctgccattcagtccatggaggagccacagatggctctctacctc
cagcaggccaaggagctgattaaaaaggttggggacatggcaaaggtggagttggctggt
cggccagaaccaggctatgaaagcatggaacagttctcagtgaatgtggaacatgtggct
gagatgctccggacaatcgacttccagactgggggttctggggaggaagaagaagaggag
ttggtgctggaaggcgaagatggcagtgccggcgctgaggaagagaaactggaggcttct
acttag

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