| Entry |
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| Symbol |
VCAM1
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| Name |
(RefSeq) vascular cell adhesion protein 1 isoform X2
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| KO |
| K06527 | vascular cell adhesion molecule 1 |
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| Organism |
shr Sarcophilus harrisii (Tasmanian devil)
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| Pathway |
| shr04670 | Leukocyte transendothelial migration |
| shr04933 | AGE-RAGE signaling pathway in diabetic complications |
| shr05418 | Fluid shear stress and atherosclerosis |
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| Brite |
KEGG Orthology (KO) [BR:shr00001]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100916035 (VCAM1)
04668 TNF signaling pathway
100916035 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100916035 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100916035 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
100916035 (VCAM1)
05143 African trypanosomiasis
100916035 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100916035 (VCAM1)
05418 Fluid shear stress and atherosclerosis
100916035 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100916035 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:shr04515]
100916035 (VCAM1)
04090 CD molecules [BR:shr04090]
100916035 (VCAM1)
04091 Lectins [BR:shr04091]
100916035 (VCAM1)
Cell adhesion molecules [BR:shr04515]
Immunoglobulin superfamily
VCAM
100916035 (VCAM1)
CD molecules [BR:shr04090]
Proteins
100916035 (VCAM1)
Lectins [BR:shr04091]
I-type lectins (Siglecs)
100916035 (VCAM1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:401376295..401399102
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| AA seq |
739 aa
MRGQKLRTVLATNFLWMVFVASEELTIEVGPSFNIAAEIGGSTTLTCNVTGCEAPLFSWR
AQIDTPLGGKVQNQGTKSVLTIDPVGLENENYYLCIASCGNNKVERGIQVKVYSFPRDPE
IEMSGPLIVGIPVTVTCKIPKVYPSEQMEIAFLKNGSEQAPDMESHDAMEENKESYLETK
SLKMTFTPTMEDMGKSLTCEAKLFFHDMEFEFKEKKTTQILQVNTVPQNATILITPSSSV
QEKDSVTMTCFSEGLPLPQIFWSKKQDGEDLLLLSENAMLTLVDMRKEDSGTYVCEAKNQ
FGTSRKEVEVIVETPLTMEISPGPKIDAQIGDSLVLTCTTMGCDAPLFSWKTLIDSPLLG
QVYSEGNKSTLIMNSIGLENEHFYVCTASCGDKKVEKVVQVKLYSFPRNPEIEMSGPVII
GSPVTVTCKVPEVYPSELLEMSFWKEDSQHHVELHNINENVEENNLETKSLKITFTPTME
DMGRSLICEAKLPIDEMEFEPKERRTIQILQVNIPPKDTRLTAFPSDSVKEGDSVTISCT
SGNVPKSQIILRKKTEMEDKKFESDTYVIRAAQLEDAGVYECESKNEGGSEVKSLTLDVK
VPPRNTTISIHPSRTVLEGENVTITCKTFSHPPAVIVLKKIDMDNEVTMCSKNGTFTLYH
VTPDDTGVYIIDVSNEVGNDSGQIEISVMEIPKYFSPQLLALYCLSSLIIPATGMVIYFA
RKANHKGSYSLVDALKSKV |
|---|
| NT seq |
2220 nt +upstreamnt +downstreamnt
atgcgagggcaaaaactcaggactgtcctggccacgaacttcctttggatggtatttgtt
gcatccgaagagctgacaattgaggttggcccaagcttcaatatcgccgctgagattggt
ggttccaccacgctgacctgcaatgtgactggctgtgaggcccctcttttctcctggaga
gcccagatagatacacctcttggggggaaggtgcaaaatcaggggaccaagtccgtcttg
accatagatcctgttggtttagaaaatgaaaattattatctatgcatagcctcatgtgga
aacaacaaagtggaaagaggaatccaggtgaaggtctattctttccccagagatcccgag
attgagatgagtggtccccttatcgttggaatacctgtcactgtcacctgcaagatccca
aaagtatatccctcagaacaaatggaaatagcattcttgaagaatggctctgaacaagct
ccagacatggaatcacatgatgctatggaggaaaataaagagagttacctggagaccaag
agtttgaagatgacctttactccaaccatggaagacatgggaaaatccctcacttgtgaa
gccaagttgttttttcatgatatggagtttgagtttaaagaaaagaaaactacacagata
cttcaggtgaacactgtaccccaaaatgcaaccatcctcatcactccttccagttctgtg
caagaaaaagattctgtgacaatgacctgtttcagcgaaggcctgccactcccccagatc
ttttggagtaagaaacaggatggagaggatttattgctcctttctgagaatgcaatgctc
accttggtggatatgaggaaggaagactctggaacttatgtgtgtgaagcgaaaaaccag
tttgggacaagtagaaaagaggtggaagtaattgtagagacacctcttacaatggaaatc
tctccaggaccaaagattgatgctcagattggagattctcttgtattgacctgcaccaca
atgggttgtgatgccccccttttctcttggaaaaccctgatagatagccccctattgggg
caggtgtacagtgaaggaaacaaatctaccttgatcatgaattccattggccttgagaat
gaacatttttatgtgtgcacagcatcatgtggggacaagaaagtcgaaaaagttgtccaa
gtgaaactttactctttccccagaaatccagagattgagatgagtggccccgttatcatt
ggaagccctgttactgtcacttgcaaggtcccagaggtatatccctcagagctactggag
atgtcattctggaaggaagactctcagcatcatgtggaattgcataatattaatgagaat
gttgaagagaataacctagagaccaagagtttgaagataacctttacaccaaccatggaa
gacatgggaagatccctcatttgtgaagccaagttgcctattgatgaaatggagtttgag
cccaaagaaaggagaactatacagatacttcaagtgaacatccctcccaaagacacccgt
cttacagctttcccttcagatagtgtcaaggaaggagactcagttaccatttcctgcaca
tctgggaatgttccaaagtctcaaatcatcctgaggaagaaaacagagatggaagataaa
aaatttgagtctgacacctatgtcatacgtgctgcccagttagaggatgctggagtgtat
gaatgtgaatctaaaaatgagggtggctcagaagttaagagcctgacacttgatgttaaa
gtacctcctcgaaacacaacaatatccatccatccatctagaactgttcttgaaggggaa
aatgtcaccattacatgtaaaacttttagtcatcctcctgcagtgattgtcctcaaaaaa
attgatatggataatgaagtgactatgtgttcaaagaatggaacatttaccttatatcat
gtcactcctgatgacacaggggtgtatataatcgatgtttccaatgaggttggaaatgac
tctggacagattgagatctcagttatggaaattcctaaatatttttctcctcaacttctt
gcactatactgcttgtcttccttgataatcccagctactggaatggtcatctattttgca
agaaaagccaaccacaaaggttcttacagcctggtagatgctctgaaatcaaaagtgtag |
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