Sarcophilus harrisii (Tasmanian devil): 100916082
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Entry
100916082 CDS
T02286
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
100916082 (GEN1)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100916082 (GEN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
100916082
NCBI-ProteinID:
XP_031805463
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Position
2:complement(4320010..4339408)
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AA seq
866 aa
AA seq
DB search
MGVNDLWQILEPVKRHAPLRSLQGKTLAVDLSLWVCEALAVKKMVGIVVKPHLRNLFFRI
SSLTLMEVKLLFVMEGDAPKLKADVMGKRNETRFGAPQNRAHKFTRSSFKAVLKECLDLL
ECLGVPWVQASGEAEAMCAYLDAHGYVDGCLTDDGDAFLYGAQTVYRNFTMNAKDPHVDC
YTMSSIKRDLGLDRDTLIGLAVLLGCDYLPKGVPGVGKELALKLVRSLKGQNLLQKFDQW
KEESHSPDLPPAPVRKPAHCNVCAHPGSPGDHELRGCRLCGSERYCEPHDPKYRCLCDWH
RAEHRRLQGAAENSVKKKACACQGFPFPEVIREFQVNKDRVTKKICFRRPDLLSFQIFAL
EKLEWPRHYACEKLMGLLAHHDMVERKLGHKGPAQLRPLRITRSRLRSGVPCLEILWQKP
EHYVMASAAPQAGPLAVLTVEEAALFEAAYPEVVAQYQEQLQENQGKKSKSKKNKDKGGD
LLDVGEVTGLLAHVRLSHEMGPGQAAKAALKAPPEEEWPQRNSPVGGSRLWSGAPLSLEA
WQLPAPTPTPASTPTPLRLGGSQHGWASSHLLSMSELQDDSSAIEALQLSTIDWEGTSFS
VSPGAHSSGPSGDSPHEPQSTGSARTHSSLGSTLQPLKEWGCAQPLAQPQLSAPDGRHGH
WADPEASALQRKGAFTAKSGPSFEPQQPNCSPPGLFPVFRLQSSLDQSDMASRRAPRAGA
FAPLGSGNPTLRPLGRGLPRLHPEAQATPKRFPKKTVCLPCSSSEEEDELTSRSEKCLRP
KGKPEQRPPAWLQTSVPRPDPRTLCKGAGAPCSATATSTFDLLDAAGSSLRPGLCPSPPG
ETKAASLLLESPLPLAQRLKLRFQSS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaatgatctgtggcagattctggagcctgttaagcggcacgcccctctccgg
agtctccaggggaagaccctggccgttgacctgagtctctgggtatgcgaagcacttgct
gtcaaaaagatggtcggcatcgttgtcaagccccacctcaggaacctgttttttcgcatc
tcatctctaaccttaatggaagtaaaactgctcttcgtcatggaaggcgacgctcccaag
ctgaaagcagacgtgatgggcaaacggaacgagacgcgcttcggggccccccaaaaccgg
gcccacaaattcacaagatcctctttcaaggctgtcttaaaagagtgccttgacttgttg
gagtgcttgggagttccgtgggttcaggcatccggggaagccgaggctatgtgcgcctac
ctcgatgcccatggctatgtggacgggtgcctcactgacgatggagacgctttcctttac
ggagcacagactgtttatcgaaatttcactatgaatgcaaaggacccccatgtggattgc
tacacgatgtcctcgattaagcgggatctgggcctggatcgggacaccctgattggcctg
gccgtgctgctgggctgtgactaccttccgaagggagtccctggagttggaaaggagctg
gcgctaaagcttgtgcgctctttgaaagggcagaacttgctgcagaagttcgatcagtgg
aaggaggagtcccacagccccgacctgccgccagccccagttaggaagccagctcattgc
aatgtgtgcgcccatccaggctcccccggggaccacgagctgcgcgggtgccgcctgtgc
ggcagcgagcgctactgcgagccccacgaccccaagtaccgctgcctgtgcgactggcac
cgcgccgagcaccgccggctacagggtgctgccgagaacagcgtcaagaagaaagcttgc
gcttgccaaggattcccgttccctgaggtcattcgagaattccaggtaaacaaggatcga
gtgaccaagaaaatctgcttccggagacctgacctcttgtccttccagatttttgccttg
gagaagctggagtggccgcggcactacgcctgcgagaagctcatggggctcttggcccat
cacgacatggtggaacggaagcttgggcacaagggccccgcccagctgcggcccctgcga
ataacccgctcccgcctcaggagcggcgtcccttgcttggagatcctgtggcagaagcca
gagcactacgtaatggccagcgcggctccccaggccgggccactcgccgtgctcacggtg
gaggaagccgccctgtttgaagctgcctaccccgaggtggtcgcccagtaccaggagcag
ctgcaggaaaaccaggggaagaagtccaagagtaagaagaacaaggacaaggggggcgat
ctgctggatgtgggcgaggtgaccggccttctggcccacgtgagactctcccacgagatg
ggcccgggacaggccgccaaggcagccctgaaagcgcccccagaggaggaatggccgcag
agaaacagccccgtggggggcagccggctttggagtggggctcccctaagtctggaagcc
tggcagctgcccgcccccacccccacccccgcttccacccccacccccctgagactcggg
ggctcacagcacggttgggccagcagccatctgctgtccatgtccgagctccaggacgat
agctcggccatcgaggccctccagctgagcaccatcgactgggagggcacctctttcagc
gtctccccgggggcccactcctcagggcccagcggcgacagcccccacgagccccagagc
accggctcggccagaacccattcgagcctcggctcgacccttcagcctctgaaggagtgg
gggtgtgcccagccactggcgcagccccagctctcggctccggacgggcgccacggccac
tgggccgacccggaagcctcggcgctgcagaggaaaggggccttcactgcgaaaagcggc
ccctccttcgagccccagcagcctaactgtagccccccaggtcttttcccagtgttccgt
ttgcagagcagcctggaccagtctgacatggcaagcaggagggcacccagagctggagcg
tttgcgccccttggctccggcaatccaacgctgagacccctgggccgggggctcccccga
cttcatcccgaggctcaggctactccgaagagattccccaaaaagaccgtctgcctcccc
tgcagctcctcagaggaggaggacgagctgactagcaggagcgagaagtgcctgcggccg
aaggggaagcccgagcagcgccctccggcctggctccagaccagtgtcccgcggccagat
cccagaaccctctgtaagggagccggggctccatgctcggccacggccacctccacattc
gacctcctggacgctgcggggagctcgctgcggccaggcctgtgcccgtccccgcccggg
gaaacgaaggctgccagtctgctcctggaaagccctctgcctttggcccagagactgaaa
ctgcgattccagagcagctga
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