Sarcophilus harrisii (Tasmanian devil): 100916193
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Entry
100916193 CDS
T02286
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04140
Autophagy - animal
shr04148
Efferocytosis
shr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100916193 (VPS11)
04148 Efferocytosis
100916193 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100916193 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100916193 (VPS11)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100916193 (VPS11)
Hops complex
100916193 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
VPS11_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
Vps39_2
Paralemmin
zf-RING_11
TPR_11
zf-ANAPC11
zf-C3HC4_3
DLP_helical
zf-RING-like
DUF5847
Stv
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100916193
NCBI-ProteinID:
XP_031815976
Ensembl:
ENSSHAG00000010127
LinkDB
All DBs
Position
3:358821172..358829095
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AA seq
649 aa
AA seq
DB search
MCRSEFTSRDSQSSDKQILNIYDLCNKFIAYSSIFEDVVDVLAEWGSLYVLTRDGRVHVL
QEKDTQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYI
RTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEE
FIKTKSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKVQLEDIKNYQEALQY
IGKLPFEQAESNMKRYGKILMHHVPEQTTQLLKVLCTDYRPCAEAAAESDGPGCRANSEE
FIPIFANNPRELKAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEKDPQVKEKLHAEALS
LLKSGHFANVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERH
GEQEPSLWEQALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIK
DYLVQKLQKQSQQIEKDELRVRRYREETTRIRQEIQELKTSPKIFQKTKCSICTSALELP
SVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRTQEQKRDLHDQFQHQLKYSN
DSFSVIADYFGRGVFNKLTLLTDPPVGRVGTSLEAGLQRDLLLHSKRGT
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagatcagagttcaccagcagggactcccagagctccgacaagcagatcctcaac
atttatgatctatgcaacaagttcattgcctatagctccatctttgaggatgtggtagat
gtgcttgctgagtggggctctctgtacgtgctgactcgagatgggcgagttcatgtgctt
caggaaaaggacacccagactaaattggagatgttgtttaaaaagaatctgtttgagatg
gcaatcaacttggccaaaagccagcacctggatagtgatgggttggcacagatcttcatg
cagtatggggaccacctctacagcaagggaaaccatgatggtgctgtccagcagtatatc
cgcaccatagggaaattggagccatcctacgtgatccgaaaattcttggacgcccagcgc
atccacaacctgactgcctatctccaaaccctccatcggcagtcattggccaatgctgac
cacaccactctgttgctcaattgctacacaaagctcaaggacagctccaagctagaggaa
ttcatcaagacaaagagtgaaagtgaagttcactttgatgtagaaacagctatcaaggtc
cttcggcaggctggctactattcccatgccttgtacttggctgagaatcatgctcaccat
gagtggtacctgaaggttcaactagaggacatcaagaactaccaggaggcattacagtat
attgggaagctgccttttgaacaagcagaaagcaacatgaagcggtatggcaagatcctc
atgcatcatgtgccagaacagactacccagttgctgaaagtcctgtgtactgactatcgg
ccctgtgcagaggctgctgctgagagtgatgggcctggctgcagggccaattctgaagaa
ttcattcccatttttgccaacaacccaagagaactgaaggccttcctagaacatatgact
gaggtgcaggcagattcaccccagggtgtctatgatactttgctcgagctgagactacaa
aactgggctcatgagaaggacccacaggtcaaagagaagctccatgctgaggcactctct
ctcttgaagagcggccactttgccaatgtcttcgataaggccttggttctttgccagatg
catgattttcaagatggtgtcttatacctctatgagcaaggaaagctgttccagcagatc
atgcattaccatatgcagcatgaacagtatcgacaggtgattgctgtttgtgaacggcat
ggtgaacaggagccttctctatgggagcaagcgctcagttactttgcccgcaaggaggaa
gactgcaaggaatatgttgctgccgtgcttaaacatattgaaagcaagaacctcatgcct
ccccttttagtggtgcagaccttggctcacaactcaacagccacattgtctgttatcaag
gactatctggtacagaagctgcaaaagcagagccagcagattgagaaagatgagcttcgg
gtacgaaggtatcgggaagaaaccacccgtatacgtcaagagatccaggagctaaagacc
agcccaaagatcttccagaagacaaagtgcagtatctgcaccagtgctctggagctgccc
tctgtccactttttgtgtggccattcattccatcaacactgttttgagagctactcagaa
agtgatgctgactgtcccacctgcctccctgaaaatcgcaaggttatggacatgatccgg
acccaggagcaaaagcgggatttgcatgatcaatttcagcaccagcttaaatactccaat
gatagcttctctgttatcgctgactactttggacgtggtgtcttcaacaagttgaccctg
ctgaccgatccccctgtgggcagagtgggcaccagcctggaagctggactgcaacgagac
ctgctcctgcactccaagcggggtacctaa
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