Sarcophilus harrisii (Tasmanian devil): 100916266
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Entry
100916266 CDS
T02286
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00310
Lysine degradation
shr00514
Other types of O-glycan biosynthesis
shr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100916266 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100916266 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shr01003
]
100916266 (COLGALT1)
Enzymes [BR:
shr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100916266 (COLGALT1)
Glycosyltransferases [BR:
shr01003
]
O-Glycan biosynthesis
O-linked Gal type
100916266 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
100916266
NCBI-ProteinID:
XP_023352366
Ensembl:
ENSSHAG00000012223
UniProt:
G3WFV2
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All DBs
Position
1:complement(646285795..646315850)
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AA seq
627 aa
AA seq
DB search
MGTVWAGSRSRSSSPRAGRLLGLALCAAAALLLRGPGRAAAYFPEERWSPESSLQAPRVL
IALIARNAAHALPSTLGALERLRHPRDRTALWVATDHNVDNTSAVLREWLVGVKSLYHYV
EWRPMEEPRSYPDEDGPKHWSNSRYEHVMKLRQAALKSARDMWADYILFLDADNLLINPD
TLSLLIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRRRDRRGCFAVPMVH
STFLIDLRKEASRELSFYPPHPDYTWSFDDIIVFAFSCKQAEVQMFVCNKEVYGFLPVPL
RAHSSLRDEAESFMHAQLEVMVKYPPVEPSHFTSVQAKVPDKMGFDEVFMINLKRRSDRR
ERMLRTLYEQEIECKVVDAIDGKAMNTSQVEALGIRMLPGYQDPYHGRPLTKGELGCFLS
HHQIWKEVVERGLEKSLVFEDDLRFEIFFKRRLMNLMYDIEEEGLEWDLIYVGRKRMQVE
HPEKAVPHVRNLVEADYSYWTLAYVISLQGAQKLLDAQPLSKMLPVDEFLPVMFDKHPVS
EYKEHFEKRDLLAFSVEPLLVYPTHYTGDDGYISDTETSVVWNNEKVKTDWDRAKSQKMK
EQQELSREAKNSDVLQSPLDSTARDEL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagtctgggccgggagccggagccggagctccagccccagggccgggcgcctg
ctgggcctggcgctgtgcgccgccgccgcgctgcttctgcggggcccgggcagagctgcc
gcctacttccccgaggagcggtggagccccgagtcttctctgcaggcgccgcgggtcctc
atcgccctcatcgcccggaatgcggcccacgcgctgccctcgactctgggcgccctggag
aggctgcggcacccgcgggaccggactgcgctatgggtggccacagaccataatgtggac
aacacctcggcggtgctgcgggagtggctggtgggcgtgaagagcttgtaccactacgtg
gagtggcgacccatggaggagccgaggtcctatcctgatgaggatggccccaagcattgg
tccaattctcgctatgagcatgtaatgaagctcagacaggcagccttgaaatcagctcga
gatatgtgggcagactatattctgtttctggatgcagataacctcctaataaacccagac
actctctccctgctgatcgcagagaataagacagttgtggctcccatgctggactccaga
gctgcctattccaatttctggtgtggaatgacttctcagggctattacaaacgaacaccc
gcatacatacccatcaggaggcgggatcgccgtggctgctttgctgttcccatggtgcac
tccacctttctgatagacctcaggaaagaggcttcccgggagctctccttctacccccca
catcctgattatacctggtcctttgatgacatcatcgtctttgctttctcctgcaagcaa
gcagaagtgcagatgtttgtctgcaacaaggaggtctatggcttcctcccagtgccactg
agggcccacagctcccttcgagatgaagccgagagcttcatgcatgctcagcttgaagtc
atggtaaagtaccccccagtggaaccttcacattttacctctgtccaggccaaagtaccc
gataagatgggctttgatgaggtcttcatgattaatcttaagcgtcgatcggacagacgt
gaacgtatgctaaggactctctatgagcaagaaattgaatgcaaagttgttgatgcaatt
gatggaaaagccatgaacacaagccaagtggaagcgctggggattcggatgctgccaggt
tatcaggacccctaccatggtcggccactcaccaagggagagttgggctgcttcctcagt
caccaccaaatctggaaggaggtggtggagcgtgggctggagaaatctctcgtgttcgag
gacgacctccgctttgagattttctttaagagacgcctgatgaatctgatgtatgacatt
gaggaagaaggcctggagtgggacctgatctacgtgggcaggaagcggatgcaagtggag
cacccagagaaggcagtgccacatgttcggaacctggtagaggctgactactcctactgg
accctggcctatgtcatctccctccagggagctcagaagctgctcgatgcccagcctctt
tctaagatgctgcctgtggatgagttcctgcctgtgatgtttgataaacatccagtctct
gaatacaaagaacactttgagaagcgagacctcctggccttctcggtggagcccctgctt
gtgtaccccactcattacacaggggacgatggctacatcagtgacacagagacctcagtt
gtgtggaataatgaaaaggtgaagacagactgggatcgagccaagtcccagaaaatgaag
gagcagcaggagctgagcagggaagccaagaactcagacgttttacagtctccgcttgac
agcacagcccgagatgagctgtga
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