Sarcophilus harrisii (Tasmanian devil): 100916424
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Entry
100916424 CDS
T02286
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X2
KO
K14309
nuclear pore complex protein Nup93
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100916424 (NUP93)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100916424 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100916424 (NUP93)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100916424 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
100916424
NCBI-ProteinID:
XP_003757318
Ensembl:
ENSSHAG00000011804
UniProt:
G3WEE8
LinkDB
All DBs
Position
2:474219983..474346091
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AA seq
819 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLENLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDPLDFTQENEPSYISDLGPPGRSSLDN
IEMAYARQIYIYNEKIVNGHLQPNLVDLCAAVAEMDDKNISDMWAMVKQMTDVLLAPATD
ALKSRRSIEVQMEFVRQALRYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPAPLPGLQDGEVEGHPVWALIYYCMRCGDLVAASQVVNRAQHQLGEFKTWFQEYMHNKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCILGRCDVTDNQSEVADKTEDYLWLKLNQ
VCFEDDGTSSPQDRLTLSQFQKQLLEDYGESHFAVNQQPFLYFQVLFLTAQFEAAIAFLF
RVERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEAGDPPCVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDK
FTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISTPQSNK
ERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHCGHIDRAFDIIDRLKLV
PLNQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQFKRLKGTSPSSTSRPQRVIED
RDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggatactgaaggctttggtgaacttcttcaacaggctgaacagcttgccgctgagact
gaaggtatttctgagcttcctcatgtagaacgtaacttacaagaaatccaacaggcgggt
gaacgactgcgctctcgcacactgacacgtacatcacaggagacagctgatgtcaaggcg
tcagttcttcttgggtctagaggacttgacatatcccacatttcacaaaggttggagaat
ttgagtgctgcaactacttttgaacctctcgagcctgtgaaagatacagatattcagggc
tttctgaagaatgaaaaggacaatgcattgctgtctgccattgaggaatccagaaaacgg
actttcggcatggctgaagaatatcatagagagtcaatgttggtggaatgggaacaagtt
aaacaacggattcttcatacattgcttgcttcaggagaagatcctctcgactttacacaa
gagaatgaaccaagttacatcagtgatttgggacccccaggccgaagctctttagataac
attgagatggcttatgcccgacagatttacatttataatgagaagatagtgaatggacat
ctgcagcctaacctagtagacctttgtgccgctgttgcagaaatggatgataagaatatt
tcagatatgtgggcaatggtgaaacaaatgacagatgtattgttggcccctgcaacagac
gcgttgaaaagtcgaaggagcatagaggttcaaatggaatttgtaaggcaggctttacgt
taccttgagcaaagttacaaaaattatacacttgttactgtttttggaaatctgcatcaa
gcccagttgggtggtgtgcctggaacttaccagctggttcgaagttttcttaatatcaaa
ctcccagcacctcttccaggacttcaggatggagaagtggaaggacatcctgtttgggca
ttaatttattactgcatgcgctgtggagatttagttgcagcttcacaagtggttaatcga
gcccagcatcagctgggagaatttaaaacttggttccaagaatatatgcacaacaaggac
agaagattatcccctgccactgaaaataaacttcgtctccattatcgacgtgcccttaga
aacaacactgacccctacaaaagagccgtttattgtatccttggcagatgtgatgtcact
gataatcagagtgaagtggctgataaaacagaagattacctttggttaaagttgaatcaa
gtatgttttgaagatgatggcacaagttctccccaagatagactcactttatcacagttc
cagaagcaattgttggaagactatggggaatcccattttgctgtcaaccaacagcctttt
ctgtacttccaagtgctcttcctgacagcacagtttgaagctgcaattgcttttctcttc
cgtgtggagcgcctacgctgccatgctgttcatgtagctctggtactgtttgagctaaag
cttctcttgaaatcatctggccagagtgcacagcttttaagtcatgaggctggcgatcct
ccttgtgtaaggcgtcttaattttgttcgtcttttaatgctctatacccggaaatttgag
tcaacagacccaagagaagcattgcagtacttttactttctcagggatgaaaaagatagt
caaggagaaaacatgtttttgcgctgtgttagtgaacttgtaatagaaagtcgagagttt
gatatgattcttgggaaactggagaatgatggaagtagaaagcctggagttatagataag
tttaccagtgacacaaagcccattatcaacaaagtggcttcagtggcagaaaataaagga
ttatttgaagaagctgcaaaactttatgaccttgcaaagaatgcagacaaggttctagag
ctgatgaacaagttgctcagtccagtcgttccccagatcagtactcctcagtccaataaa
gagaggctgaagaacatggcactttccatcgcagaacggtacagagctcagggaataagt
gcaaacaaattcgttgactccacattctatcttctgttagacttgattacattttttgac
gagtatcattgtggtcacattgacagggcctttgatataattgatcgcctgaaacttgtg
cccctgaatcaagaaagtgtggaagaaagagtagctgccttcagaaacttcagtgatgaa
gtcagacataacctgtcagaagtgcttcttgccaccatgaacatcttgttcacccaattc
aagagactaaaaggcacaagtccatcttcaacatccagacctcaacgagttatagaagac
agagattctcaactccgaagtcaagcacgagcattgattacgtttgctgggatgatcccc
tataggacatcaggagacacaaatgcaagactggtgcaaatggaggtccttatgaattaa
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