Sarcophilus harrisii (Tasmanian devil): 100916448
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Entry
100916448 CDS
T02286
Symbol
CNTN4
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100916448 (CNTN4)
Cell adhesion molecules [BR:
shr04515
]
Immunoglobulin superfamily
Contactins
100916448 (CNTN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Ig_C17orf99
Sp38
V-set_CD47
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
100916448
NCBI-ProteinID:
XP_031809984
Ensembl:
ENSSHAG00000018520
LinkDB
All DBs
Position
1:41022022..42200445
Genome browser
AA seq
1027 aa
AA seq
DB search
MRLLWELLVLQSFMLCLADDNTLHGPIFIHEPSHVMFPLDSEEKKVKLNCEVKGNPKPLI
RWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLY
IAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKG
ATVKLECFALGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAENS
RGKNVARGQLTFYAQPNWIQKINDIHVAIEESIFWECKANGRPKPTYRWLKNGESLLTQD
RIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGPDFSRTLLKRMTLVK
VGGEVVIECKPKASPRPVYTWKKGKEIVRENERITFSEDGSLRIMNVTKSDAGSYTCIAT
NHFGTASSTGNLVVKDPTRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGRLI
DFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPP
EAVTIDEITDTTAQLSWRPGADNHSPVTMYVIQARTPFSVGWQAVNTVPELIDGRTFTAT
VVSLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITW
ETVPEELQNGGGFGYVVAFRPFGKVSWMQTVLASADASRYVFRNESLPPFSPYEVKVGVY
NNKGEGSFSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSSPLESLSKGRIQGYEVK
YWSHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPYSVTVNVTTKKP
PPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVE
LSLPFDEDYIIEIRPFSDGGDGSSSEQIRIPKISSAYARGSGASTSNACTLSAISTIMIS
LTARSSL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggaactcctggtgctgcaatcattcatgttgtgccttgcagatgac
aatacactgcacggaccaattttcatccacgaaccaagccatgtgatgttcccattggat
tcagaggagaagaaagtgaaattgaattgtgaagttaaggggaatcccaaaccacttatc
aggtggaagttaaatggaacagatgttgacattggtatggatttccgctacagtgtggtt
gaaggcagcttgttgatcaataaccccaataaaacccaagatgctggaacataccagtgc
atagcaacaaactcatttggaacaattgtgagcaaggaagcaaaacttcagtttgcttat
ctggaaaacttcaaaacaagaacaagaagtaccgtgtctgttcgccaaggtcaaggaatg
gtgctcttgtgtggtcccccacctcattctggagaattgagctatgcttggatcttcaat
gaatacccatcataccaggataacagacgctttgtttctcaagagactggaaacctatat
attgccaaagtggaaaaatcagatgttggaaattacacctgtgtagtaaccaacacagtc
acaaaccacaaagtgctaggacctcctacacctttaatactgaggaatgatggggtcatg
ggtgaatatgagccaaaaatagaagtgcagtttccagagacagtcccaaccgcaaaagga
gcaactgtgaagttggaatgctttgctttgggaaatccagttccaactattatctggcga
agagctgatggaaagccaatagccaggaaagccagaagacacaaatctaatggaattctt
gaaattccaaatttccagcaggaagatgctggtctatatgaatgtgtagctgaaaattca
agagggaaaaatgtggccagaggacagttgactttttatgctcagcctaactggatccaa
aagataaatgatatacatgtggccattgaagaaagtatcttctgggagtgcaaagcaaat
gggagaccaaagcctacatacaggtggctaaaaaatggtgaatcattattaactcaggac
agaattcaaattgagcatgggacactgaacataaccaccgtgaacctttctgatgcaggc
atgtatcaatgtgtggctgaaaacagacatggaattatttttgccagtgccgagctcagt
gttattgctttgggtccagatttctccagaactcttttgaaaaggatgacccttgttaaa
gtaggaggcgaagttgtcattgagtgtaaaccaaaggcttccccacggcctgtctataca
tggaaaaaaggaaaggagatcgtaagagaaaatgaacgaattactttttctgaagatgga
agccttagaatcatgaatgtgacaaagtccgatgctgggagttacacttgtattgcaact
aatcattttggaactgctagcagtaccggaaacttggtggtaaaagatccaacccgcctt
ctggtacctccatccagtatggatgttactgttggagaaagcattgttcttccttgccaa
gtatcccatgatcactcactggacattgtgtttacttggtcatttaatggacgcctgatt
gattttgacaaagatggtgaccattttgaaagagtaggagggcaggattcagctggtgat
ttgatgatccgaagtatccagctgaagcatgctgggaaatatgtctgcatggtacaaaca
agtgtggacaagatatcagcaactgcagacctgattgtaagaggccctccaggtccccca
gaggctgtgactatcgatgaaatcacagatacaacagcccagttgtcctggaggccagga
gcagataaccacagtcccgtcactatgtatgtcattcaggccagaactccattttccgtg
ggctggcaagcagtcaatacagtcccagagctcatcgatgggaggacattcactgctact
gtagtgagcctgaacccttgggttgaatatgaattccgtgttgttgcagccaacaccatt
ggaattggggagccaagccgaccttcagagaaacgaagaactgaggaagccctccctgaa
gtcaccccagctaacgtcagtggaggtggaggcagcaaatctgagctggtcataacctgg
gagactgtccctgaagaattacaaaatggaggtggttttgggtatgtggtagcatttcga
ccctttggcaaagtgagctggatgcagacggtgttagcttctgcggatgcctccagatac
gtgttcaggaatgagagtctgcctccattctccccctacgaagtgaaagtgggagtctac
aacaacaaaggagaaggctctttcagcccagtcacagtggtgtattctgcggaagaagaa
cctactaaaccaccacccagcatttttgccagaagcctctctgccacagacattgaagtt
ttttggtcctcccctctagagtcccttagcaaaggacggattcagggttatgaggtcaaa
tactggagccatgatgataaagaagagaatgctagaaaaataagaacaatcggaaatcaa
acatcaacgaaaataaccaatttgaaaggcagtgctttatatcatttggctgtcaaggcc
tacaacactgctggaactggaccctacagtgtgactgtcaatgtgacaacaaaaaagcca
ccaccaagtcaaccccctggaaacatcatatggaattcatctgactccaaaattatactg
aattgggatcaagtcaaagccttggacaatgaatccgaagtaaaaggatacaaagtttta
tatagatggaacagacaaagcagcacatctgtaattgaaacaaacaagacatctgtggag
ctttctttgccttttgatgaagactacataatagaaattaggccatttagtgatggagga
gatggcagtagcagtgaacaaattcgaattccaaagatatcaagtgcatatgcaagagga
tctggagcctcaacttcaaatgcttgcacgttgtcggccatcagtacgataatgatatcc
ctcacagcgagatccagtttatga
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