Sarcophilus harrisii (Tasmanian devil): 100916606
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Entry
100916606 CDS
T02286
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X2
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100916606 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100916606 (SPTBN1)
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100916606 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
100916606 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CENP-K
SOS1_NGEF_PH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
100916606
NCBI-ProteinID:
XP_012395672
Ensembl:
ENSSHAG00000010204
LinkDB
All DBs
Position
2:96866953..97132488
Genome browser
AA seq
2349 aa
AA seq
DB search
MELQRTSSISGPLSPGYTSQVPYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSC
RITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENM
GSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNV
NIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDP
EDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASD
LLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKM
RANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAM
RETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAENY
HDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLS
QDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRV
AHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKILSSDDYGKDLTSV
VRLLSKHKAFEDEMSGRSGHFEQAIKEGEDMITEEHFGSEKIRERIIYIREQWANLEQLS
AIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQSLVKKHKDVAEEI
ANYRPTIDTLHEQAGALPQEHAESPDVRGRLSGIEERYKEVAELTRLRKQALQDTLALYK
MFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIAR
QLMHSGHPSEKDIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIRE
KTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAI
LSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNT
LAEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNE
LHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEAAEAAIKKQED
FMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKD
NRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLDKI
EKAGMQLIAEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDANKAELFTQSCADLD
KWLNGLESQIQSDDYGKDLTSVNILLKKQQILENQMDVRKKEIEELQSQAQALSQEGKST
DEVDSKRLIVQTKFMELLEPLNERKSNLLASKEIHQFNRDVEDEILWVGERMPIATSTDH
GHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDSSSLNAEAIRQRLTDLRQL
WSLLIEETEKRHRRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKK
HQILEQAVEDYAETVHQLSKTSRALVADNHPESERISMRQSKVDKLYAGLKDLAEERRGK
LDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE
RVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD
AKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAA
YAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQ
IEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLL
QLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVE
KLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPPSPEPRTKVSEET
ESQQWDASKGEQVSQNGLPAEQGSPRMAETVETREMVNGATEQRTSSKESSPIPSPTSDR
KAKTSIQAQTAATLPAKTQETPSAQMEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEM
GFYKDSKAASSGIPYHSEIPVSLKEASCEVAVDYKKKKHVFKLRLNDGNEYLFQAKDDEE
MNSWIQAITSAISSDKGEISASTQSTPASSRAQTLPASVTITSESSPGKREKDKEKDKEK
RFSLFGKKK
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaagaacgtccagtatctcggggcccttgtctcctgggtatacgagtcag
gtgccttacaattataatcagctagaaggaaggttcaaacagctccaagatgaacgtgag
gctgtacaaaagaagacttttaccaagtgggtgaattcacaccttgcccgtgtgtcctgt
cgaatcacagatttgtacactgatcttcgagatggacgaatgctcatcaaactgcttgag
gttctctctggagagagacttcccaagccaacaaaaggaagaatgcgcatccattgtctg
gagaatgtggataaagcccttcagtttctgaaagagcagagagttcatcttgaaaacatg
ggatcccatgacattgtggatgggaatcatcgcctgactcttggtctcatttggaccatc
atcttgaggttccagattcaagatatcagtgtggagactgaagacaacaaagagaaaaaa
tctgccaaagacgcattgctgttgtggtgccagatgaaaacagctggatatcccaatgtc
aacattcacaactttactactagctggagagatggcatggcttttaatgcacttatacac
aaacaccggcctgacctgattgattttgacaaactgaagaaatccaatgcacattacaat
cttcagaatgcttttaacctggcagagcagcatctgggtctcaccaaactcctggatcca
gaggatatcagtgttgaccatcctgatgagaaatccattattacttatgtggtgacatat
taccactacttttcaaagatgaaggccttagctgttgaaggaaaacgcattgggaaggtg
cttgacaatgccattgaaacggagaaaatgattgagaaatatgaatcactagcctcagac
ctcttggagtggattgaacaaaccatcattatcttgaacaatcgaaaatttgccaactcc
cttgtgggagtccaacagcagctacaggcattcaacacttaccgcactgtggagaaacca
cccaagttcacagaaaaaggaaatttggaagttcttcttttcaccatccaaagtaaaatg
agagccaataatcaaaaagtatatatgcctcgggaggggaagctcatctcagatattaat
aaggcctgggaacgactggaaaaagctgaacatgaaagagaactggcactgcggaatgag
ctcataagacaagagaaactggaacaacttgctcggagatttgatcgcaaggcagctatg
agggagacatggctcagtgaaaatcaacgtctggtgtctcaggacaactttgggtttgac
cttccagctgtggaagctgccactaaaaaacatgaggctattgaaacagacattgctgcc
tatgaggaacgtgtccaggctgtggtagctgtagccaaagagctggaagctgagaattac
catgacatcaaacgtatcacagcaaggaaggacaatgtcatccgcttatgggagtacctg
ctggagctgctcagagcacgaaggcagcgtcttgagatgaacttgggacttcagaagata
ttccaggaaatgctttacattatggattggatggatgaaatgaaggtgctactcttgtct
caagactatggcaaacatttgttaggtgtggaagacttattgcaaaagcatgctttggtt
gaagctgacattggtatccaggcagaaagggtgaggggtgtgaatgcctctgctcagaag
tttgctacagatggtgaaggttataaaccttgcgacccacaagtcatccgagacagagta
gcccatatggagttttgttaccaagaactttgccagttggccgctgaacgacgagctcgc
ctcgaggaatctcgccgcctgtggaagttcttctgggaaatggcagaagaggaaggttgg
ataagagagaaagagaagatcctctcctccgacgactacgggaaagacctgaccagtgtt
gtccgcctgctcagcaagcacaaggcatttgaggatgagatgagcggacgcagtggccac
tttgaacaggccatcaaggaaggggaagacatgatcaccgaagagcactttggttctgag
aaaatccgagaaagaatcatttacatccgggagcagtgggcaaacctggaacaactttcg
gccattcggaagaagcgcctggaggaagcttctcttctccatcagttccaggcagatgct
gatgacatcgatgcttggatgttggatatcctcaagatcgtctctagcagtgacgtgggc
cacgatgagtactccacacagtccttggtcaagaagcataaggatgtagctgaagagatt
gccaactacagacccaccattgacaccttgcacgagcaggccggcgccctgccccaagag
catgccgagtctccagatgtgcgaggccgcttgtccggaatcgaagagcggtacaaagaa
gtggcagagctcacgcggctccggaagcaggcactccaggacaccctcgccctctacaag
atgttcagcgaggcggacgcctgcgagctgtggattgacgaaaaggagcagtggctgaac
aacatgcagatcccagagaagctggaggacctggaggtgatccagcacagatttgaaagc
ttggaacctgaaatgaacaaccaggcgtcacgggttgcagtggtgaaccagatcgcacga
cagctgatgcacagtggccatccgagtgagaaggacattaaggcccaacaggacaaactc
aacacaaggtggagccagttcagagaactggtagacaggaagaaagatgctctcctatca
gccttaagtatccagaactaccatcttgagtgcaatgaaaccaaatcctggataagggaa
aagaccaaagtgattgaatccactcaggacctaggtaatgacctagcaggagtcatggct
ctgcagagaaagctgaccggcatggagcgagacttagtggccatcgaggcaaagttgagt
gacctgcagaaagaggcagagaaactagagtctgagcatccagatcaggcccaagccatc
ttgtcgagactggctgagatcagtgacgtgtgggaggagatgaagaccaccctgaagaac
cgagaggcttccttgggagaagccagcaagctgcagcagttcctgcgggacctagatgac
ttccagtcgtggctgtccaggacccagacggcaatcgcctcagaagatatgccgaacacc
ctggcagaagccgagaagctccttacacagcatgagaacatcaagaatgaaatcgacaat
tatgaggaagactaccagaagatgagggacatgggcgagatggtgacccagggccagaca
gatgctcagtacatgttccttcgtcagcgtctgcaggctttggacaccggatggaatgag
cttcacaaaatgtgggaaaacaggcaaaacctcctgtcccagtcccatgcataccagcta
ttccttagggacacaaagcaagcagaagcatttcttaataaccaggagtatgttttggct
cacactgaaatgcccaccaccttggaggctgcagaagcagcaattaaaaagcaagaagat
ttcatgaccacaatggatgccaatgaggaaaagatcaatgcagttgtagagacaggccgg
agactggtcagtgatgggaacatcaattcagacaagatccaggagaaggtggactcaatt
gatgatagacacagaaagaatcgtgaggcagccagtgagcttctgatgagactgaaggac
aacagggatcttcagaaattcctgcaagattgtcaagagctttccctttggatcaatgaa
aagatgctcacagcccaggatatgtcttatgacgaagccagaaatctgcacagcaaatgg
ctcaagcaccaagcttttatggcagaacttgcatctaacaaagaatggcttgacaaaatt
gaaaaggcaggtatgcagctcattgcagagaaaccagagacagaagccgtagtgaaggag
aaactcacaggtttacataaaatgtgggaagtcctcgaatccactacccagaccaaggcc
cagcggctctttgatgctaacaaggctgaacttttcacccagagctgtgctgatttggac
aaatggctgaatggcctagagagccagattcaatctgatgactatggcaaagatcttacc
agcgtcaacattctgctcaaaaagcaacagatacttgagaatcaaatggatgtgcggaag
aaggagattgaggagctccagagccaggcccaagctttaagtcaggaaggaaagagtaca
gatgaagttgatagtaaacgtcttatcgtgcaaacgaaatttatggaattgctagagccc
ctgaatgagaggaagagtaatctgctagcctccaaggagatccatcagtttaacagggat
gtggaggatgagattttgtgggttggtgagagaatgcccatagcaacttccacggatcat
ggccataacctccagactgtacagctgttaataaagaaaaatcagaccctccagaaggaa
atccagggacaccagcctcgcatcgatgacatttttgagaggagccaaaacattctcact
gacagtagtagccttaatgccgaagcaattaggcagaggctaacagacttaaggcagcta
tggagccttctcattgaagagacggagaaacgccacagaaggctggaagaatcccacaaa
gcccagcagtattacttcgatgctgcagaggctgaagcctggatgagcgaacaggaactc
tatatgatgtcagaagagaaagccaaggatgaacagagcgccgtttccatgctgaagaag
caccagattttggaacaagcagtagaagattatgctgaaacagtgcatcagctctctaag
accagccgagctcttgtagctgacaatcacccagagagtgaacgcatcagtatgcgacag
tccaaagtagataagctgtatgcaggtctgaaggaccttgctgaagagagaagaggaaaa
ctagatgagagacacaggcttttccagcttaaccgagaggtggatgatttggagcagtgg
attgctgaaagggaagtggtggcaggatcccatgagctgggccaggattacgaacatgtc
acaatgttacaagagcgattccgagaatttgcacgagatactggaaacattgggcaggaa
cgtgtggacacagttaatcacatggcagatgacctcatcaactccggacattctgatgct
gccacgattgccgaatggaaagatggtctcaatgaggcctgggctgacctccttgagctc
attgacacaagaacacagattcttgccgcttcttatgaactgcacaaattttaccatgat
gctaaggagatcttcggacgtatacaggacaaacacaagaagctgcctgaggaacttgga
agagaccagaacacagtagagacattacagagaatgcatacaacgtttgaacatgacatc
caggctctaggcactcaggtacggcagctccaagaggacgctgcccgtcttcaggcggcc
tatgctggagacaaggccgatgacattcagaagagggagaatgaggtcttagaagcctgg
aaagctctcttggatgcttgcgaaggacgcagggtgaggctggttgatacaggagacaag
ttccgtttcttcagcatggtgcgtgacctcatgctttggatggaagatgtaattcggcag
attgaagctcaggaaaagccaagggacgtgtcatcagttgaattattaatgaataaccat
cagggtatcaaagcagaaattgatgcccgcaatgacagcttcactacttgcatcgagctt
gggaaatctctattggcaaggaaacactatgcatcagaggagatcaaggaaaagttattg
cagttgactgaaaagagaaaagaaatgattgacaagtgggaagaccgatgggaatggcta
agactgattttggaggtacatcagttctcaagggatgccagtgtggctgaggcctggctg
ctgggacaagaaccatatctgtccagtcgggaaataggccaaagtgtggatgaggtggag
aaactcatcaaacgccatgaggcgttcgaaaagtcagcagctacatgggatgagagattc
tctgcattagaaaggttgacaacattggaattactggaagtgcgcagacagcaagaggaa
gaagagaggaagaggcaacctccgtctccagagcccagaacgaaagtttcagaggaaaca
gagtcacagcagtgggatgcttccaaaggagaacaagtttcccaaaatggtttgcctgct
gaacagggatctccacggatggcagaaactgtggaaacgagggaaatggtcaatggagct
acagagcagagaacgagctcaaaagaatccagccctatcccctcccccacttcagatcgc
aaagccaagacttccattcaggcacaaacagcggccactttgccagccaaaacccaggag
accccgtcagctcagatggaaggcttcttgaatcggaagcatgaatgggaggctcacaat
aagaaagcttcaagcaggtcatggcataatgtctactgtgtgattaataatcaagagatg
ggcttctacaaagactcaaaggctgcaagttctggtattccctaccacagtgaaattcct
gtgagtttgaaagaagcatcctgtgaagtagcagttgactacaagaagaaaaaacatgtg
ttcaaactaagactaaatgatggcaatgagtatctcttccaagccaaagatgatgaggaa
atgaattcgtggattcaggccatcacttccgccatctcctctgacaaaggtgaaatctcc
gccagcacccagagcactccagcctccagccgagcccagaccttgccggccagtgttaca
atcaccagcgaatctagtcctggcaagcgtgagaaagacaaagagaaagataaagagaaa
cggtttagcctttttggaaaaaagaaatga
DBGET
integrated database retrieval system
