Sarcophilus harrisii (Tasmanian devil): 100916643
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Entry
100916643 CDS
T02286
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04340
Hedgehog signaling pathway
shr05200
Pathways in cancer
shr05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100916643 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100916643 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
100916643 (PTCH2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
100916643
NCBI-ProteinID:
XP_031825091
UniProt:
G3WBT4
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All DBs
Position
4:29702060..29715327
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AA seq
1252 aa
AA seq
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MAPGELLTSGPAPPAQGRAPLWLRAHVGGLLFSLGCAIQRHCGKVLFVGLLAFGALALGL
RGAAVETDLERLWVEVGSRVSQELRYTKEKLGEEAVYTSQTLIQTARHPGESVLTPEALG
LHLQAALAASKVQVSLYGKSWDLNKICYKAGVPVIENGMIERMIEKLFPCVILTPLDCFW
EGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDKAQVGQAYVGRPCL
HPSDPHCPASAPNRQSRQVPDVARELSGGCHGFSRKFMHWQEELLLGSPVRSPQGRLLSA
EALQSTFLLMSPRQLYDHYRGDYETHDISWSESQAGAVLQAWQRRFVELAQQAIPQNASQ
QIHAFSATTLDDLLRSFSDISAVRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLV
ALSVASGLGLCSLLGMTFNAATTQVLPFLALGIGVDDMFLLAHAFTEAPSGTPLQERTGE
CLQRMGTSVVLTSVNNLVAFFMAALVPIPALRAFSLQAAVVVGCNFAAVLLIFPAILSLD
LHRRHRQRLDVLCCFSSPCSSRVIQIQPQELGEGQVPRSGAHLTATVQAFARCDTAGQHV
VTILPPTTHLTSLPTESLGSQLFGPMGSTRDLLGQVPGPGRGQVCRPLPCARWNLSRFAR
CQYAPLLLQPRTKGLVLVLFGALLGLSLYGATWVQDGLTLTDVVPRGTKEYDFLAAQIKY
FSLYEVALVTQGGFDYARSQQALLDLHKRFSALKSVLAPQPPRSWLHRYSAWLQGLQAAF
DQDWAAGRITRHSCRNGSEDGALAYRLLIQTGDAKEPLDYSQLDKRKLVDADGLILPELF
YVGLTVWVSRDPLGLAASQANFYPPPPEWLHDKYDSTGESLHIPAAQPLEFAQFPFLLSG
LRQTADFVEAIEGARAACAEAARAGIRAYPSGSPFLFWEQYLGLRRCFLLAVCVLLACTF
VVCALLLLSPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASVGIGVEFTAHV
ALGFLTATGSRDARSAQALEHMFAPVMDGAVSTLLGLLMLAGSDFDFIVRYFFVVLTVLT
GLGLLHGLVLLPVLLSIIGPPPQVPLPDGGGRPPCPDPVSLPLSPPHFFLGPSPAFRAPE
TGAGDAPSTFILPPAHSHILVEASKDPSFPTITVVQTYKDGSPGSGLPPLTATAGSEARW
GPHASPGAFTTVTASVTVALHPPPLPGSYVQEVPEEARPPMAGESKGPGPRC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggccccgggggagctgctgacctccggccccgcgccccccgcgcagggccgggccccc
ctctggttgcgagcccacgtgggcggcttgctcttcagcttgggctgcgcgatccagcgg
cattgtggcaaggtgctcttcgtggggctgctggctttcggggcccttgcgctgggcctg
cgtggggctgccgtggagacagacctggagcgcctctgggtggaagtgggcagccgggtg
agccaggagctccgttacacaaaggagaagctcggggaagaggccgtgtacacctctcag
accctcatccagaccgcccgtcatccgggcgagagcgttctcacacccgaggctctgggc
ctccaccttcaggctgccttggcagctagcaaagttcaagtttccctctatggaaagtcc
tgggatctgaacaaaatctgctacaaggcaggagtccctgttattgagaatgggatgatt
gagcggatgatcgagaagctgtttccctgtgtgatcctcaccccgctggactgcttttgg
gagggagccaaacttcaggggggctccgcgtacctaccgggccgacctgatattcagtgg
accaacctggatcctgagcaacttctggaagaactcggcccctttgcctccctggagggc
tttagggagctgctggacaaggcccaggtgggccaggcctacgtgggacggccctgcctg
catcccagtgatccccattgcccagccagtgcccctaatcgccagagcaggcaggtccca
gatgttgcccgggagctgagcggcggctgccatggcttctcacgcaagtttatgcattgg
caggaggagctgctgctggggagcccggtgaggagccctcagggccggctgctcagtgcg
gaagccctgcagagcaccttcctgctcatgagcccccggcagctgtatgaccattaccga
ggagactatgaaacccatgacatcagctggagcgagtcccaggcaggcgctgtgctgcag
gcctggcagaggcgcttcgtggagctggcccagcaggccatcccccagaatgcgtcccag
cagatccacgccttctctgccaccaccctggatgacctcttgcgctccttctctgacatc
agtgcagtccgtgtggcggggggctacctcctcatgctggcttacgcctgcgtgaccatg
ctccgctgggactgctccaagtctcagggggccgtgggcctggccggggtccttctggta
gccctgtctgtggcctctggcctcgggctctgctcgctgctgggtatgaccttcaatgct
gctacgactcaggtgctcccattcctggccctgggcatcggggtggacgacatgttcctg
ctggcccacgccttcaccgaggccccctcgggcacccccctgcaggagcggaccggcgag
tgcctgcagcgcatgggcaccagcgtggtgctcacctccgtcaacaacctggtcgccttc
ttcatggccgccctggtgcccatccccgcccttcgcgccttctccctccaggctgcggtg
gtggtcggctgcaactttgctgctgtgctgctcatcttcccggccatcctcagcttggac
ctgcaccggcggcaccggcagcggctggatgtgctctgctgcttctccagcccatgttct
tcccgggtgattcagatccagcctcaggagctgggggaggggcaggtgcccaggagcggg
gcccacctgacagccacggtccaggccttcgcccgctgcgacacagccggccagcacgtc
gtcaccatcctgccccccaccactcacctgacgtccctccccaccgagtctctgggctcc
cagctctttggccccatgggttcaaccagagacttgctgggccaggtgcccgggccgggc
cggggccaggtgtgccgcccgctgccctgtgcccgctggaacctctctcgctttgcccgg
tgccagtacgcccccctgctgttgcagccccgaaccaagggcctggtactggtgcttttc
ggggccctcctggggctgagcctgtacggagccacgtgggtgcaggatgggctgaccctg
acggatgtggtgccccggggcaccaaggagtacgacttcctggccgcccagatcaagtac
ttctccctgtacgaggtggcccttgtgacccagggtggcttcgactacgcccgctcccag
caggccctgctggacctgcacaaacgcttcagcgccctcaaatccgtgctggcgccgcag
ccaccgagaagctggctacaccgctacagcgcctggctccaggggctccaggccgccttt
gaccaagactgggccgccggccgcatcacgcgccactcgtgccgcaacggctccgaggat
ggagccctggcctacaggctgctcatccagacgggggacgccaaggagccgctggactac
agccagctggacaagcggaaactggtggatgctgatggcctcatcctgcccgagctcttc
tacgttgggctgaccgtgtgggtgagcagagaccctttgggcctggcagcctcccaggcc
aacttctaccccccgccccccgagtggctccacgacaaatatgacagcactggggagagc
ttgcacatccctgcggcccagcctttggagtttgcccagttccccttcctgctgagcggg
ctccgccagacggcagacttcgtggaggccatcgagggggcccgggcggcctgcgcagag
gcggcccgcgctgggatccgggcctaccccagcggctccccgttcctcttctgggagcag
tacttgggcctccgccgctgctttctgctggccgtctgcgtgctgctggcctgcaccttc
gtggtctgtgccttgctgctgctcagcccctggaccgccggcctcattgtgctggtgctg
gccatgatgactgtggaattattcggcatcatgggcttcctgggcatcaaactcagcgcc
atccccgtggtgattctcgtggcctccgtgggcattggcgtcgagttcacagctcacgtg
gctctgggcttcctgacagccaccggcagccgggacgcgcggtcagcccaggccttggag
cacatgtttgcgcccgtgatggatggggccgtgtccacgctgctgggcctgctcatgctg
gccggctcggacttcgactttattgtcaggtacttctttgtggtgctgacagtgctgacc
ggcctgggcctgcttcacgggcttgttctgcttcctgtgctgctgtccatcataggaccc
ccaccccaggtaccgctgccagatggaggcggccgcccgccctgccctgacccggtatcg
ctgcccctcagtcctcctcacttcttcctgggcccgagcccagccttcagggctcctgag
acaggagcaggggacgccccaagcaccttcatcctgcccccggcccactcccacatcttg
gtggaggccagcaaggaccccagcttcccgaccatcacggtggtgcagacgtacaaggat
ggttctcctggctccgggctacctccccttacggccacggccggcagtgaggcccgctgg
gggccccatgccagccccggcgccttcaccaccgtgacggcctccgtcaccgtggccctg
cacccgccgccactgccgggtagctacgtccaggaggtccctgaggaagccaggcccccg
atggccggcgagtccaagggacctggcccccgctgctag
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