Sarcophilus harrisii (Tasmanian devil): 100916704
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Entry
100916704 CDS
T02286
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shr04990
]
100916704
Domain-containing proteins not elsewhere classified [BR:
shr04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
100916704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
COLFI
F5_F8_type_C_2
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
100916704
NCBI-ProteinID:
XP_012398109
Ensembl:
ENSSHAG00000002005
LinkDB
All DBs
Position
1:222097845..222702433
Genome browser
AA seq
1312 aa
AA seq
DB search
MNMNMDSVTEAFLKLLFLLPIQNWSPVVSGNIHNCDDPLVSTLPQSSFSCSSELSSSHSP
GFARLNRRDGAGGWSPLVSNKYQWLQIDLGDRMEITAIATQGGYGSSDWVTSYLLMFSDT
GRNWKQYRQEESIWGFSGNTNADSVVYYKLQHSIKARFLRFIPLDWNPNGRIGMRIEVYG
CSYRSEVVDFDGKSFLLYRFDEKSTNPLKDVISFKFKTIESDGILLHRKGQNGDYITLEL
IKGKLFLFINSGDTKLHSTNSLINITTGSLLDDLHWHSVLIEYFNKQVNFTVDKHTQHFH
AKGEFNYLDLNYELSFGGTLASGKSVSFSHRNFHGCFENLYCNGINIINLAKRQKPQIYI
MGNVSFSCSQPQTVPVTFLGSGSYLALHGSSGQDEISVSFQFRTWNKMGLLLSSNFHQYS
GGLLLYLHDGKIKLNLFKLGKQQSDITAGVELNNGQWHSISLSAKRNHLSIMIDNDVTSV
LHFVLPMQIYSGDIYYFGGCPNTSSDYECKNPFGGFQGCMRQISISNKVVDLISVQQSIF
GNFSDLQIDLCGLIDRCLPNYCEHGGECSQSWNSFYCNCTNTGYMGATCHYSIYEQSCEA
YKHKGNTSGFYYIDSDGSGPLGPFLVYCNMTDTSWTIVQHNSSDFTRVKSSNRENPHTVF
FKYTANTEQLQATINHAEHCEQELAYHCKKSRLLNKRDGIPLSWWVGRTNETQTYWGGSS
PNIQKCTCGLQGNCIDSQYYCNCDADRNEWANDTGFLSYKEHLPVTQIVITDTDRPNSEA
AYKLGPLLCRGDRSFWNSASFNTETSYLHFPTFHGELSADVSFFFKTTASSGVFLENLGI
KDFIRIELHSPAEVTFSFDVGNGPFEVMVQSPTHLNDNQWHYVRAERNIKEASLQVDQLP
PKSQAAPVDGHILLQLNSQLFVGGTASRQKGFLGCIRSLQLNGIALDLEERAKITPGVDP
GCPGHCSSYGNLCHNGGKCKEKHSGFSCDCSFSAYSGPFCLNEISAYFGSGSSVTYNFQE
YYTLSKNSSSHAASFHGDMTLIRETITFSFRTTRTPSLLLYVGSFYKEYLSVILAKNGSL
QIRYKLDSHQEPDVFNSNFKNMADGQLHHVKINREEGVLFVEVNQNPREQVTLSSGIEFN
AIKSLVLGKILENNDVDQETMKANSQGFIGCLSSVQFNHIAPLKAALHHTSSAPVTIKGH
VAESNCGTLTGAESTLSETTHSFADHSGPIDEGEPLANAIRSDSAIIGGVIAVVIFILLC
ITAIAVRIYQQKSLYKKNETKRAENEDCTETALKSELTMQNRVNENQKEYFF
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaacatggattctgtcactgaagccttcctcaagctcctgtttctcttacct
attcaaaattggagcccagtagtatcaggaaatatacataattgtgatgacccgctggtt
tcaactttgcctcagtcatcattcagttgttcctcagagttatctagcagccatagccct
gggtttgcaagacttaatcgaagagatggagctggtggctggtctccacttgtgtcaaat
aagtatcagtggctacagattgatcttggtgacagaatggaaatcactgctattgctacc
caaggtggatatgggagttctgattgggtaacaagctatctcctgatgtttagtgatact
ggaaggaactggaagcaatatcgtcaagaagaaagcatctggggattttcaggaaataca
aatgcagacagcgttgtatactataaactccaacattccatcaaagctaggtttctacgc
ttcatccctctggattggaacccaaatggcaggattgggatgcgaattgaagtgtatggt
tgttcatacaggtctgaagtggtggattttgatgggaaaagtttcttgctctacagattt
gatgaaaaatccacaaatcccttaaaagacgtgatttctttcaaatttaaaacaatagaa
agtgatgggattctgcttcacagaaaaggacaaaatggagattacatcaccctggaatta
ataaaagggaaactcttcttattcattaattcaggtgatactaaactgcattctactaac
agcctcattaacatcaccacgggcagcctcttggatgatctgcactggcattctgtcctt
attgagtactttaataaacaagtaaactttaccgtggataaacacactcaacattttcat
gcaaagggagaattcaattacttggacctaaattatgagctcagctttggagggactcta
gcatctggaaaatcagtatcattttcccataggaatttccatggctgttttgaaaatctt
tattgtaatggaattaatataattaatttggccaagagacagaaacctcagatctacatt
atgggaaatgtgtcattttcttgttcacaaccacaaaccgttccagtaacttttttgggc
tctggcagctacctagcactacatggttcctctgggcaggatgaaatatctgtgagtttt
caatttcgcacttggaataaaatgggacttctgctatccagtaactttcatcagtattct
ggaggtctcctcctctatcttcatgatggaaaaattaaactgaatctcttcaaattagga
aaacaacaaagtgacataacagcaggagttgaattaaataatgggcaatggcattcaatt
tccttatctgctaaaagaaatcacctgagtataatgatagataatgatgtgacttcagtt
ctgcattttgtgctgccaatgcagatttattcaggagacatctattattttggaggttgt
cctaataccagctctgactacgaatgtaaaaatccttttgggggttttcagggatgcatg
agacagatttccattagcaacaaagttgtggatctgatttcagtacaacagagcatcttt
gggaatttcagtgaccttcagatagacttatgtggcctaatagacaggtgtttacctaac
tattgtgaacatggtggtgaatgctcacaatcatggaacagtttctattgcaactgtaca
aatactggttacatgggagctacttgtcattactccatctatgagcagtcctgtgaagcc
tataagcacaaagggaatacttctggtttttattatatcgattcagatggaagtgggccc
ctgggaccttttcttgtatactgcaatatgacagatacttcatggactattgtacagcac
aacagctcagacttcaccagagtaaaaagttccaatagagaaaaccctcatactgtgttt
ttcaagtatactgccaatacagaacagctccaggctacaattaaccatgcagaacattgt
gaacaggagcttgcttaccattgcaaaaagtccaggcttttaaataagagagatggaata
ccattaagttggtgggtcggaagaaccaatgaaacacagacttattggggaggttcctcg
cctaatattcaaaagtgtacttgtggattacaagggaactgcattgattctcagtattac
tgcaactgtgatgctgatcggaatgaatgggctaatgatactggattcctttcttataaa
gaacatctgccagtaactcaaatagtaattacagatacagaccgaccaaattctgaagca
gcttataaactggggccattgctttgtcgaggtgatagatcattttggaattcagcttcc
ttcaatactgagacatcataccttcatttccctaccttccatggagaacttagtgcagat
gtgtcttttttttttaagactacagcttcatccggtgtatttttagagaacctggggatt
aaagattttataagaatagaactacattctccagctgaagtgacattttcatttgatgtg
gggaatggaccatttgaagttatggtgcaatcacccactcacctaaatgacaatcagtgg
cactatgtcagagctgaaagaaacattaaagaagcatcacttcaagtggatcagcttcca
ccaaaatcacaggctgcccccgttgatggacatatccttttgcagctcaacagtcagcta
tttgttggtgggacagcctcaagacagaaaggatttttgggatgcattcgttctttacaa
ttgaatgggatagccctggatttggaagaaagagccaagattaccccaggagtggatcct
gggtgccctggacactgtagtagctatggaaatttatgccacaatggaggaaaatgtaaa
gaaaaacacagtggattctcttgtgattgtagcttctctgcatacagtgggccattctgt
ttgaatgagatttctgcatattttggctctggctcttcagtgacttacaattttcaagaa
tattatactttaagtaaaaattccagctctcatgctgcttcatttcacggtgacatgaca
ctcatcagagaaacaatcacatttagctttcgaacaacgcggactccaagcttgttgctt
tatgtaggctccttctataaagaatacctttcagttattcttgcaaaaaatggaagtttg
cagatcaggtacaaattagatagccatcaagagccagatgtttttaacagcaatttcaaa
aatatggctgatggacagcttcaccatgtgaagattaacagagaagaaggtgtactattt
gtagaggttaaccagaatccaagagagcaagtcaccctgtcctctggtatagaattcaat
gcaatcaaatcccttgttcttggcaagattttagaaaataatgatgtcgaccaagagaca
atgaaagccaactcacaggggttcattggatgtctctcttctgtgcagtttaaccacatt
gctcctttgaaggctgcattacatcacacaagttcagctccagtcactattaaaggacat
gtagctgaatcaaattgtggcactttaactggagctgagtcaacactgagtgaaaccaca
cattcatttgcagatcattctggaccaatagatgagggagagcccttagctaatgcaatc
agaagtgactctgcaataattggaggtgtgatagcagttgtgatatttatcttgctttgc
atcactgccattgcagtacggatttatcaacagaaaagcttgtataaaaaaaatgagaca
aagagggcagaaaatgaagactgtactgagactgccctgaaaagtgagctcaccatgcaa
aatagagttaatgaaaatcagaaagaatatttcttttga
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integrated database retrieval system
