Sarcophilus harrisii (Tasmanian devil): 100916980
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Entry
100916980 CDS
T02286
Symbol
SRSF4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040
Spliceosome
shr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100916980 (SRSF4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100916980 (SRSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100916980 (SRSF4)
Spliceosome [BR:
shr03041
]
Common components
Common spliceosomal components
SR proteins
100916980 (SRSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100916980
NCBI-ProteinID:
XP_031818267
Ensembl:
ENSSHAG00000012407
LinkDB
All DBs
Position
3:553456842..553486276
Genome browser
AA seq
449 aa
AA seq
DB search
MPGVPVETAVMVLDAYWYLLEPPKGGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQD
LKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDRPGS
RRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRSKSR
SRGKKDKSRSPSKEDKSRSRSRSLDKARSKSKDQAEEKVQNNEEDSKAKSRSASQDKSKS
RSRSKERAEKEERRGSRSRSQDTGTGKARSRSRSKSKGQSRSRSRSRSKSKDKRKGRKRS
RDESRSRSRSRSRSRSRSRSRSRSRSRSRSKSSKSKRHSKRESKASSSKKKSKEDPERSR
SRSRSRSQSKGKEHLKLEAGPKEGKGDGEDAQANQEAQSRSRSNSKSKPNIQSESRSRSK
SASKTRSRSKSRSASRSRSRSRSRSRSRS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggtccccgtcgagacggcagttatggttctggacgcatattggtatctgctt
gaacctcccaaaggtggatatggttatagaagaagtggaagagataaatatggtcctcca
actcgtacagagtacagattgattgtggaaaatctgtccagccgctgcagttggcaagat
ttaaaggattatatgcgtcaagcaggagaagtaacatatgcagatgctcacaaagggcgc
aaaaatgaaggtgtaattgaatttgtgtcctattctgacatgaaaagagctcttgaaaag
ctggatggaacggaagtcaatggcagaaaaattagactcgttgaagacaggcctggctct
agacgacgacgttcctattctagaagtcggagtcattcaaggtcccgctctcgaagcaga
cattctcgtaagagccggagtcgcagcggcagcagcaagagcagccactcgaagagtcgg
tcccggtccaggtctggctcccattccaggagcaagagccgcagccgcagtaagagccgc
agccgaggcaagaaggacaagagtcggagcccaagcaaggaggacaaaagccgcagccgc
agccgcagcctagacaaggcccggagcaaaagcaaggaccaggccgaagagaaagtccag
aacaacgaggaggacagtaaagctaagagccgcagcgccagccaggacaagagcaagagc
cgcagccgtagcaaggagagagctgagaaggaggagaggaggggcagccgcagccgcagc
caggacactggcacgggcaaggccaggagccgcagccgcagcaagagcaagggacagagc
cgcagccgcagccgcagccgcagcaagagcaaagacaagaggaaaggaaggaagaggagc
cgggacgagagccgcagtcgcagtcgcagccgcagccgcagccgcagccgtagtcgcagc
cgcagccgcagccgcagccgcagccgcagcaagagctccaagagcaagaggcacagcaag
cgagagagcaaggcgagcagcagcaaaaagaagagcaaggaggaccctgagcgctcccgg
tccaggtccagatcccgctcccagtccaagggcaaggagcacctaaagcttgaggctggc
cccaaagaaggcaaaggcgatggggaagatgctcaggcaaaccaggaagctcagtccaga
tccagatctaattccaaatcaaaaccaaacattcaatcagaatctcgttccagatcaaaa
tcggcctcaaaaaccaggtcccggtccaaatccagatctgcctccagatcccgctccagg
tctcgatctagatcccgctcgaggtcgtaa
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