Sarcophilus harrisii (Tasmanian devil): 100917023
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Entry
100917023 CDS
T02286
Symbol
PKP3
Name
(RefSeq) plakophilin-3 isoform X2
KO
K28841
plakophilin 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04382
Cornified envelope formation
shr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100917023 (PKP3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100917023 (PKP3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ZER1-like_2nd
ARM_ARMC5
ARM_PUB
BAR1_C
ARMC9_ARM
V-ATPase_H_C
Atx10homo_assoc
WRM1_C
ARMH2
Motif
Other DBs
NCBI-GeneID:
100917023
NCBI-ProteinID:
XP_012408374
Ensembl:
ENSSHAG00000007484
LinkDB
All DBs
Position
6:234090576..234106008
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AA seq
806 aa
AA seq
DB search
MQDNNFLLSALQPGTGVCSLALPSDLQLDLKNKEALEAERERLKVARVQEQVRARMLQLG
QPSRINGSLASPPTDSAASTGPDASKGAPKCQYHPAQPGAGFSSRSQGMSMDKASTFRPI
SKPAYGTPAWSSRSAVDLSCGRRLSSAHNGSAGYVGAQPAVPMAPRPVSYHDRGGPGPRT
DYDTLSLRSLRLVGGSHGGLDDRYSVVSEQLEPPGGPSYRTFGYERQASSASSRAGGLDW
SEAADGAPGRTIRAPAMRTLQRFQSSHRSRGTASMGTGGGLEHVARAPSVRSLSLSLADS
GHLPDVRGLDCYGGHRTLQRLSSGFDDIDLPSAVKYLMASDPNLQVLGAAYIQHKCYSDA
AAKKQARSLQAVPKLVKLFNHANQEVQRHATGAMRNLIYDNADNKLALVEENGIFELLRT
LREQDDELRKNVTGILWNLSSSDHLKDRLARDTLEQLTDLVLSPLSGSGGPPLIQQNASE
AEIFYNATGFLRNLSSASQATRQRMRECHGLVDALVTYIHHALDVGKCEDKSVENAVCVL
RNLSYRLYDEMPPSALQRLEGRGRGEAGAGRPGEVVGCFTPQSRKLRELPLATDTLTFAE
VSKDPKGLEWLWSPQIVGLYNRLLQRCELNRHTTEAAAGALQNITAGDRRWAGVLSRLAL
EQERILNPLLDRVRTADHHQLRSLTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEK
PPPADVLVNIIAVLNNLVVASPIAARDLLYFDGLRKLVFIKKKRDGPDSEKSSRAASSLL
ANMWQYSKLHRDFRAKGYRKEDFLGP
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaataacttcctgctctctgccctgcagcccgggactggggtctgctccctg
gccctgccctcggatttgcaactggacctgaagaacaaggaggctctggaggcggagcgg
gagcggctgaaggtggcccgggtgcaggagcaggtccgggccaggatgctccagctgggc
caaccttccaggatcaatggctccctggccagccccccgacggactctgcagccagcaca
ggcccagatgcctccaaaggtgcccccaagtgtcagtaccacccagcgcagcctggggcc
ggcttcagctcccgctcccagggcatgagcatggacaaggcatcgactttccggcccatc
tccaagccggcatatgggacaccggcctggtcctcccgctcggccgtggatctgagctgt
ggccggaggctgagctcagcgcacaatgggtccgcgggctacgtgggggcccagcctgca
gtccccatggccccgcggcctgtctcctatcacgaccgcgggggccctggccctaggact
gactatgacactctgagcctgcgttctctgcgcctggtgggggggtcccatgggggcctg
gacgaccgctacagcgtcgtgtctgagcagctggaacctccaggggggccttcctacagg
accttcggctacgagcgacaggccagctcagcctccagccgtgcagggggcctggactgg
tccgaggccgcagacggggcccccggacggaccatccgggcccctgctatgcggactctg
cagcggttccagagcagccaccgcagccggggcacggcctccatgggaactggcggaggc
ttggagcatgtggcccgggccccctcggtccgtagcctcagccttagtctggccgactcc
ggacacctgcctgacgtgcggggactggactgctacgggggtcaccgcactctgcaacgg
ctcagcagtggctttgatgacatcgatcttccctcagctgtgaagtacctcatggcctca
gaccccaacctgcaggtgctaggggctgcctacatccagcacaagtgttacagcgacgcc
gctgccaagaaacaggcccgcagtctccaggccgtgcccaaactggtgaaactcttcaac
cacgccaaccaggaggttcagaggcacgccacgggggccatgcggaacctcatttacgac
aatgccgacaacaagctggccctggtagaggagaacggcatctttgagctgctgaggact
ctgcgcgaacaagatgacgagctgcgcaagaacgtcacgggaattctgtggaacctgtca
tccagtgaccacctgaaggaccgcctggcccgagacaccctggagcagctgacagacctg
gtgctgagcccgctctcgggctccggggggccccccctcatccagcagaatgcctctgag
gccgagatcttctacaacgccacgggtttcctcaggaacctgagctcagcctcacaagcc
acacggcagaggatgcgagagtgccacggcctggtggacgccctcgtcacctacatccac
cacgccctggacgtgggcaagtgtgaggacaagagcgtggagaatgccgtgtgtgtgctc
aggaacctctcctaccgcctgtatgacgagatgccgccctcggcgctgcagaggctggag
ggccgaggccgcggggaagccggggctgggagaccgggggaagtggtgggctgcttcacg
ccccagagcaggaagctccgagagctgcccctggccacggatacgctgacctttgcggag
gtctccaaggatcccaaggggctcgagtggctttggagtccccagattgtggggctctac
aaccggctcctccagcggtgtgagctgaacagacacacgacagaagccgctgctggcgcc
cttcagaacatcaccgctggtgaccgaaggtgggcgggtgtgctgagccgcctagccttg
gagcaggaacgcattctgaaccccttgttggaccgagtccggaccgctgaccatcaccag
ctgcgctcactcactgggctcatccggaacttgtctcggaatgcccgcaacaaggatgag
atgtccaccaaggtggtcagccatctgattgagaagctgccggggagcgttggggaaaag
ccccctccggccgacgtgctggtcaacatcatcgcggtgctgaacaacctggtggtggcc
agccccatcgccgcccgggacctgctctacttcgacggcctccgcaagctcgtcttcatc
aagaagaagcgggacgggcctgatagtgagaagtcctcccgggcggcctccagccttttg
gccaacatgtggcagtacagcaagctccaccgggatttccgggcgaaaggctatcggaag
gaggacttcctgggtccgtaa
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