Sarcophilus harrisii (Tasmanian devil): 100917024
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Entry
100917024 CDS
T02286
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shr03037
]
100917024 (PKD2)
04040 Ion channels [BR:
shr04040
]
100917024 (PKD2)
Cilium and associated proteins [BR:
shr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100917024 (PKD2)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100917024 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
100917024
NCBI-ProteinID:
XP_023362438
Ensembl:
ENSSHAG00000004518
UniProt:
G3VPR1
LinkDB
All DBs
Position
6:complement(149299895..149368030)
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AA seq
992 aa
AA seq
DB search
MVNPSRVKPQLEGGTPRRAQPLPPPRSGEPAAARGRLTMPAPGADGGGGLAAPGLSSPGG
LREQRGLEIEMERIRQAAARDPPAGASASPSPPLSACSRQAWSRDNPGFEPEEDDEDDDE
EVEGEEGGMVVEMDVEWRPGSRRSAASSVVTSSCNSGLGLGSFHGTNLQSGRRRRRETQG
PICATSAGPGESLHRHLPLDGPQPQPPPPRVSGAKRLLQALRGLWGTRLMEENNTSREKY
LKSILRELVTYFFFLVVLCILTYGMVSSSMYYYTRVMSQLFLETPVSKMEKTNFKTLSTM
EDFWKFTEGSLLDGLYWEMWYSNRTVAENRSFIYYENLLLGVPRIRQLKVRNGSCSIPPD
LREEIKECYDVYSVSNEERAPFGLQHGTAWTYTSEKDLNGSSHWGLIATYSGAGYYLDLS
RTREETAAQIASLKKNIWLDRGTRATFIDFSVYNANINLFCVVRLLVEFPATGGVITSWQ
FQPVKLIHYISTFDFFLASCEIIFCFFILYYIVEEILEIRIHKLHYFRSFWNCLDIMIIV
LSVVAIGIDIYRKSNVELLLKYLEDQNTFPNLEPLAYWQIQFNNVAAVMVFFVWIKLFKF
INFNRTMSQLSTTMSRCAKDLVGFAIMFLIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQ
FRIILGDFNFTELEEANRVLGPIYFTTFVFFTFFILLNMFLAIINDTYSEVKSDMAQQKT
EMELSDLIRKGCHKAMIKLKLRKNTVDDISESLQQNGGKLNFDELRQDLKGKGHTDAEIE
AIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDHSSLPRPMSIRSFPRNLDDSEEDD
DEDSGHSSRRRGSSSSGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLK
RREVLGRLLDGVAEDERLGRDNEIHREQMERLVREELERWESDDAASQISQRLGTPVGPN
GQPRPRSSRPSSSQSTEGVEGGGGNGGASIHG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacccgagccgcgtaaaaccccagctggagggggggacgcccaggagagcccag
ccgctgcctccaccgcgctctggcgagccagcagcggcccggggcaggctgaccatgcca
gcccccggcgctgacggcggcggcggcctcgcggccccgggcctctcctcaccgggcggc
ctccgggagcaacgagggctggagatcgagatggagcgaatccgccaggcggcggctcgc
gatcccccggccggagcctcagcgtcgccctctccgcccctctcggcgtgctctaggcag
gcgtggagccgggataatccgggcttcgagccggaggaagatgacgaggacgacgacgag
gaggtggaaggggaggaaggcggcatggtggtagagatggacgtggagtggcgtcccggc
agccgaaggtcggccgcctcctccgtggtcacctcttcttgcaacagtggcctagggctc
ggcagcttccacggcactaacctccagagcggccgccggaggaggagggagacccaaggc
cccatctgcgccacctccgcgggtcccggagagtcgctgcatcgccacctccccctagac
gggccgcagccgcagccgccgccgccccgagtgtccggggccaagagattgctccaagcg
ctgagaggtctctggggaacaagactgatggaagaaaataatacaagccgagaaaaatat
ctaaaaagtattttgcgagaattggttacatacttcttctttcttgtggttttgtgtatc
ttgacctatgggatggtgagctccagcatgtactactatacgagggtgatgtcacagctt
tttttagaaacacctgtgtccaaaatggagaaaacaaatttcaagacactctccacaatg
gaagacttctggaagttcacagagggctccttgttggatggcctctattgggagatgtgg
tacagcaacagaacagtagctgaaaaccggagtttcatttactatgagaacctccttttg
ggtgtgccccgaatccgtcaactcaaagtcagaaatgggtcttgttctatccccccagat
ctaagagaggagattaaagaatgctatgatgtttattctgtcagcaatgaagaaagagct
ccatttggtctccaacatggaacagcttggacttacacaagtgaaaaagacttaaatggg
agtagtcactggggattgattgcaacgtacagtggggcaggctattatctggacctgtca
agaaccagagaagaaactgcagcacagattgctagtctcaagaaaaacatctggttagac
agagggaccagagcaacttttattgacttctcagtatacaatgccaacattaatcttttt
tgtgtagtcagattattggttgagttcccagccactggtggagtgattacatcttggcag
tttcaacctgtgaagctgattcactacatctcaacatttgatttcttcctggcgagctgt
gagatcatcttttgtttctttatcctttattatatagtggaagagattttggaaattcgt
attcacaaattgcattatttcagaagtttctggaactgtctggatatcatgattattgtg
ctgtcagttgtagctattggaattgacatctacagaaaatccaatgtggaattgctgctg
aaataccttgaagatcaaaatactttccccaacttggagcctctggcatattggcagata
cagttcaataatgtggcagctgtaatggttttctttgtctggattaagctttttaaattc
atcaacttcaacagaaccatgagtcagctgtccaccaccatgtctcgctgtgccaaggat
cttgttggctttgcaattatgtttttgattatttttcttgcatatgctcagttagcctat
cttgtctttggcacccaggttgatgactttagcacattccaggagtgtatcttcactcaa
ttccgtatcattttgggagatttcaacttcacagaacttgaggaagctaatcgagttttg
ggacccatttatttcactacctttgtgttctttacattcttcattcttttgaatatgttt
ttggccatcatcaatgacacatactctgaagttaaatctgatatggctcagcagaagact
gaaatggaactgtcagatcttatcagaaagggctgtcataaagctatgatcaaactgaaa
cttagaaaaaacactgtggatgacatctcagagagtctgcagcaaaatggtggcaagtta
aactttgatgaacttcgccaagatctaaaagggaagggccacacagatgcagagattgag
gcaatattcacaaaatacgatcaggatggtgaccaagaattgactgaacatgaacaccag
cagatgagagatgacttagaaaaagagagggaggatctggatctggatcatagctctttg
ccccgacccatgagcattcgaagcttcccacgaaacctggacgattctgaagaggatgat
gatgaggacagtggacatagctctcgaaggaggggtagcagctctagtggagtttcttat
gaagaatttcaagtacttgttagacgcgtagaccggatggaacactccattggcagtatt
gtctccaaaattgatgctgtcattgtaaaactggaaatcatggaaagggccaaactgaaa
agacgagaagtattaggaagacttctagatggagtagcagaggatgaaaggcttggtcgt
gataatgaaatccacagggagcagatggagcgcctggtgcgggaagaattagaacgctgg
gaatcagatgatgcagcttctcaaatcagtcagcggttaggcactcctgtgggaccaaat
ggtcagccacgcccaaggagttcccgcccttcatcctcccagtctacagaaggagtagaa
ggtggaggaggaaatggaggtgccagtatccatggatag
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