Sarcophilus harrisii (Tasmanian devil): 100917042
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Entry
100917042 CDS
T02286
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03420
Nucleotide excision repair
shr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100917042 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
100917042 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100917042 (ERCC8)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100917042 (ERCC8)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100917042 (ERCC8)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100917042 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
100917042
NCBI-ProteinID:
XP_031821216
Ensembl:
ENSSHAG00000001573
UniProt:
G3VF11
LinkDB
All DBs
Position
1:complement(150698427..150756894)
Genome browser
AA seq
398 aa
AA seq
DB search
MLNFLEARQAGLDDPGRLRRAEATRRVLKLELNKDREVERIHSNGVNTLDIEPVEGRYML
SGGSDGIIVLYDLENFSRKVHYTCKAVCSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSKVKLWDIRRASGCLITLDQHNGEKSKASSEA
ANTAHNGRVNGLCFTRDGLHLLTTGTDDRMRLWNSSSGENTLVNYGKVCNESRKGLKFTI
SHGCSPEFVFVPYGSTIAVYTVYSGELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNIL
AWVPALREPLPDEDDEVVSHSQKNPAFQDAWSSSDEEG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacttcctggaggcgcggcaagcgggtctggacgatcctgggaggcttcggaga
gcggaggccacccggagggtcttaaaattggaattaaacaaagacagagaagtggaaaga
atacatagcaatggtgtcaacacccttgatattgaacctgttgaggggagatacatgtta
tcaggtggttcagatggcattattgtactttatgaccttgaaaacttcagccgaaaagtt
cattacacctgtaaagctgtttgttctgtgggcagaaaccatcctgatgttcacaaatac
agtgttgagacagtacaatggtatcctcatgatactggcatgttcacctcaagctctttt
gataaaactctgaaaatatgggacacaaacacattacaacctgcagatgtatttcatttt
gagggaacagtctatagtcatcatatgtctccagttgccaccaaacactgtttgatagca
gttggtactaaaggccctaaagtacaactttgcgacttaaagtctggatcctgttcccac
attctacagggtcacaggcaggaaatattagcagtttcctggtctccacgttatgaatat
atattggcaacagcgagtgctgacagtaaagtaaaactgtgggatattaggagagcatca
ggatgtctgattactcttgatcagcacaatggggaaaagtcaaaagcatcttctgaagca
gcaaacacagcccataatggaagagttaatggcctgtgctttacaagagatgggcttcac
cttctgactactggaacagatgatcgaatgaggctttggaacagttccagtggagaaaac
acactagtaaactatggtaaagtctgtaatgaaagtagaaaaggattgaaatttaccatc
tctcatggctgcagtccagaatttgtctttgtaccatatggtagcaccattgctgtttat
acagtttactcgggagaactgataactatgcttaggggacattataatactgttgactgc
tgtgtatttcaacctaatttccaggaactttatagtggtagcagagattgcaatattctt
gcttgggtgccagctttacgtgaacctctccctgatgaagatgatgaggttgtatctcat
tcacagaaaaacccagcatttcaagatgcatggagcagcagtgatgaagaaggatga
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integrated database retrieval system
